Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1005 ATGCATAATAATGTTAATAAGGAAGCGTTGCCATTGCCTGATCAAGTGGACAAGGCCATAAACTACATAAAGACCTTAGAGGAGAAGGTGAAGATGGCTAAGGAGAAGAGAGAGAGGTCATTGAGAATGGAAATCCAAAGAAAGAGTACACGTGGTGATTGCAGTGGTGTTGATCGCCATAAACCGCCACAATTTGAGGTTCATGAAATAGGTTCGTGTCTTGAAATTGAAATGACATATGGATTAGATACCCAGTTCATATTCTATGAAATCATTTGTATTCTAAATGAAGAGAACATTGATGTTAAGAGTGTCAAGAAAAACTCGTGTGCTTGGAGAAAAAACTATACGTTGTACGTATTTAAATTACGTTTCATAAGCCTTGAGAAACCAATTTATAAACTAATTTGTTGA 414 0.3599 MHNNVNKEALPLPDQVDKAINYIKTLEEKVKMAKEKRERSLRMEIQRKSTRGDCSGVDRHKPPQFEVHEIGSCLEIEMTYGLDTQFIFYEIICILNEENIDVKSVKKNSCAWRKNYTLYVFKLRFISLEKPIYKLIC* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1005 137 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 4 106 IPR015660 GO:0003700|GO:0006357
Amo11g1005 137 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 106 - -
Amo11g1005 137 Coils Coil 16 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1005 Amo-Chr11 29191142 29192649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1005 3 98 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 32.039 3.28e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1005 - - gmx:100817883 111.694