Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1002 ATGGGTGAGGAGGTGGAAGTGGTGGTGAGAGAGTTCGAGCCAAATAAAGACAGAGAGGGAGTAGGAGCTGTTGAGAGGATATGCGAAGTTGGACCCAGTGGCAAGATTTCCCTCTTCACCGACCTCCGCGGTGACCCTATTTGCAGGGTCCGCCACTCACCTACTTTCCTCATGCTAGTGGCTGAGATAGGCAATGAAATAGTGGGCATGACAAGAGGTTGCATCAAAACCGTTACATGCGGAAAGAAGCTCCATAGACACGGAAAAAACAACACTGCTGACTCCACCGCCAAACAAGTCCCTGTCTACACCAAACTAGCCTACATATTAGGCCTTCGCGTTTCACCACTCTACAGGAGAATGGGTATAGGTCTCAAGCTTGTACGGGCGATGGAGAAATGGTTTAGAGACAACGGTGCAGAGTACTCATACATGGCAACGGAAAACAACAACGTTGCGTCCATTAATCTCTTCACCGACAAATGCGGTTACTCAAAGTTCCGTACTCCGTCTATTCTCGTCAAACCCGTTTTCGAGCACCGGGTAAAAACCTCTTCCAAAATCAAAATCATAAAGCTTGACCAAAACGACGCCGAATCACTATACCGACTCAGATTCTCCACAACGGAGCTCTTCCCGCGCGACATTGACTCTGTTCTTAACAACAAGCTCTCACTTGGAACCTTTTTGGCGGTTCCGAGAGGGGGTTACGGGCCTGACACGTGGCCCGGCCCGGCACATTTTCTTGCTTCCCCGCCTCACTCCTGGGCCGTCCTCAGCATTTGGAACTGCAAAGAAGTGTTCTCACTTGAGGTGAGAGGCGTGTCGCGCGTGAAGCGGGCTTTAGCGAAAATGACACGTGTCGTTGATCGGGCTTTCCCATGGCTCGGGCTTCCTTCGATACCGAATTTCTTCAGGCCGTTCGGGTTTCATTTCTTGTATGGAGTTGGAGGGGAGGGACCTGAGGCGGTTAAGATGGTTCGGGCTTTGTGTGGGTTTGCACACAACCTGGCGAAAGAGAAAGGGTGCGGGGCGGTGGCGACGGAGGTTTCGAGGCTGGAACCGCTGCGGTTAGGAGTGCCGCACTGGAAGATGCTGTCGTGTGAGGAGGATCTATGGTGCATAAAACGGTTAGGGGAGGATTACAGTGACGGATCAGTTGGTGACTGGACCAAATCTCCCCCTGATTTTTCAATTTTCGTTGACCCTAGAGAGGTCTGA 1221 0.5168 MGEEVEVVVREFEPNKDREGVGAVERICEVGPSGKISLFTDLRGDPICRVRHSPTFLMLVAEIGNEIVGMTRGCIKTVTCGKKLHRHGKNNTADSTAKQVPVYTKLAYILGLRVSPLYRRMGIGLKLVRAMEKWFRDNGAEYSYMATENNNVASINLFTDKCGYSKFRTPSILVKPVFEHRVKTSSKIKIIKLDQNDAESLYRLRFSTTELFPRDIDSVLNNKLSLGTFLAVPRGGYGPDTWPGPAHFLASPPHSWAVLSIWNCKEVFSLEVRGVSRVKRALAKMTRVVDRAFPWLGLPSIPNFFRPFGFHFLYGVGGEGPEAVKMVRALCGFAHNLAKEKGCGAVATEVSRLEPLRLGVPHWKMLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPDFSIFVDPREV* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1002 406 PANTHER N-ACETYLTRANSFERASE 2 405 - -
Amo11g1002 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 167 IPR016181 -
Amo11g1002 406 Gene3D - 47 171 - -
Amo11g1002 406 Pfam Acetyltransferase (GNAT) family 52 164 IPR000182 GO:0016407
Amo11g1002 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 7 194 IPR000182 GO:0016407
Amo11g1002 406 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 2 405 - -
Amo11g1002 406 CDD NAT_SF 58 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1002 Amo-Chr11 29124024 29125643 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo11g1002 Acetyltransf_1 4.8e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1002 - - gmx:100775317 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1002 11 29124024 29125643 Amo11g1002 11 29124024 29125643 ECH
Amo05g0595 05 6882597 6884464 Amo11g1002 11 29124024 29125643 PCT
Amo11g1002 11 29124024 29125643 Amo05g0595 05 6882597 6884464 PCT