Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo11g0989 | ATGAAAACTCATAATTGGAGCTGCTTCTTTATTATCTTATCAATAGAGTTTTGGACCATCCTCTTCTTCGCCTTTCCCTCCGCAAAAGCCCTCAAGGCATTTCAATTATGTAATAATGCTTCAAAATCCAACTCAAGAAGAATTCTACACCAGCCGCTTTTTCCGGCAGCATCAGCTCCGGCGTTACCTCCGCCTTCGCCGTCACTGGACACTCCTTCCCCTCCGGAAATTCCTTTCTTCAACGAGAATCCACCAGGTCCACCGCAGGCGGACCTGAACCAGCAGCCGGCAGCGGTGGACACCACCAACGGCCGAATTGCAAACCCGACGGCAACGCAGCCGGCGAAGCCGGTTAAGACAGTGGCGATTGTGGTATCTGTCGCGTTCGTTACGTTTGCAATGCTGTTTGTGCTGGCGTTCTTCTTGTATAAGCAAACGGCGAAGCAGCAGCCGGCGGAGACGACGCAGAAGCTGGTGGCCGTAGGGTCACGAAACGAGTTGCCACCACCGGCGGCGGCGGCGCCACCGTCTAGTTTGTACTACATTGGGACGGTGGATCCAAGCAGAGCGTCGGTGAGCGAACCGAGTGAAGAAGCCACTTCGAGTGAAATGAACCGTTCTTCATATCGAAAACTGAATTCGATGAAGGTTTCAGAAAGGTACCGTCCCAGCCCCGAGCTTCAGCCATTGCCGCCGCTAAGCAAAACCGTCGCCGACGGCAGCCATCCGCCACCGGCTGCCTCCTCGTCATCTTCGTCCGATGACGAAGTGGATAGCCGAGACACGGCGTTTCACTCGCCACAGGCCTCATCTCTCAGCCTCGATGACGGTTACCACACGCCGGTTTCGCGCCATAGTTATCTCTCCAACGGTAGCGGTACTGCGGCGGCACCGCCAGTTCCTTTCTCGAAGAGAACTTCTCCGAAGTCTCGGATTTCAGCTTCGTCGGATACCAGAATCGCCATGATGCCACCAATTAAGCATGCTCCGCCACGGTCACCATCCCCGACACAGCAAGAATCTACCTCCGGTCCTTCCAGACGGCCGACATTCTCGGCACCTCCTCCAGCACCAAATTTAACTCATATTCATTCAAATATGTCCAAGAATTCAATCAATCCTCCGCCACCGCCACCACCTCCTCCTCCGCCAATGCGAGCAGCGCCCCGGAAGGTTCAGTCTCCAGCAATAAATTTGACCTCGTCATCGACGTCGTCCTCCCTCCCTGCTTCAAGAATTCAGCAGGAGTCTTGGTCTCGGAGCCAAGTTGCAGCATCCGCTGCAAAGAGCATTGCAAAGGCTTCAGAGGAGTTAAACAAGATGAAGAGCGTGGCATCATCTGAGAAGTTGGACGGTGATGACGTGGAAGGAGGAAGACCCAAGCTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACATCTGAYCGTGCCACTGTGTGGGACCAGTTAAAGTCAAGTTCGTTTCAATTAAATGAGGGCATGATGGAATCTCTCTTTGGCTGCGGTGCCACCAGTTCTACACCTAAAGAAACGGTTACAAGGAAATCAGTTATTCCGCCCGTTGAACAGGAGAACAGAGTGTTAGATCCCAAGAAGTCCCAAAACATTGCTATAATGCTCAGGGCACTCAATGTTACTAGAGATGAGGTCTCCGAAGCTCTCTTGGACGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACTCTTGTAAAGATGGCACCAACTAAAGAGGAAGAAATAAAACTCAAAAGCTATGATGCTGGTGTTTCAAAACTAGGCTCTGCAGAGAGATTCCTTAAAACTGTCCTTGACATACCATTAGCCTTCAAAAGAGTGGAAGCCATGTTGTACAGAGCGAATTTTGACACAGAAGTTAACTACCTTAGGAAATCCTTTCAAACCCTCGAGACAGCGAGTGAGGAATTGAAGAACAGCCGGTTGTTCCTCAAACTCCTTGAAGCTGTTCTTAGGACAGGGAACAGAATGAATGTTGGAACCTACCGTGGCGATGCCAAGGCGTTCAAGCTAGACACACTCCTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTTCACTTTGTTGTCCAAGAAATCATTAGAACGGAAGGTTCAAGTGGCGAATCGTCCAGCAAAAATGCACAGGCAGAAATGAATTCTCAATTTAATGATGATGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGAAACGTGAAAAATGCTGCAGGAATGGACTCCGAAGTCTTAAGTAGTTATGTCTCTAAGCTCGAATCGGGTCTTGATAAAGTGAGATTGGTTCTGCAGCATGAAAAGCCGGGTATGCAGGGGAATTTCTTCAACTCAATGAAGCTATTCCTGAAAGTTGCCGAAGCGAAAATCGTTACGATTAAGTCTGATGAGAGAAAGGCTTTGTTCCTTGTGAAAGAAGTAACAGAGTACTTTCATGGGAATATGGCAAAGGAAGAAGCGCATCCTTTTAGAATTTTCATGATTGTGAGAGACTTTCTCAATATTTTGGATCAGGTCTGCAAAGAAGTGGGGAAGATGCAGGACAAAACTGTGATTAGCTCCGCGAGATCCTTCAGGATAGCCGCGAGCGCGTCGTTACCAGTTCTCAACAGGTACCATGCAAGGCAAGATACAACCAGTTCAGATGAAGAGAGCTCATCTCCCTAG | 2709 | 0.4928 | MKTHNWSCFFIILSIEFWTILFFAFPSAKALKAFQLCNNASKSNSRRILHQPLFPAASAPALPPPSPSLDTPSPPEIPFFNENPPGPPQADLNQQPAAVDTTNGRIANPTATQPAKPVKTVAIVVSVAFVTFAMLFVLAFFLYKQTAKQQPAETTQKLVAVGSRNELPPPAAAAPPSSLYYIGTVDPSRASVSEPSEEATSSEMNRSSYRKLNSMKVSERYRPSPELQPLPPLSKTVADGSHPPPAASSSSSSDDEVDSRDTAFHSPQASSLSLDDGYHTPVSRHSYLSNGSGTAAAPPVPFSKRTSPKSRISASSDTRIAMMPPIKHAPPRSPSPTQQESTSGPSRRPTFSAPPPAPNLTHIHSNMSKNSINPPPPPPPPPPPMRAAPRKVQSPAINLTSSSTSSSLPASRIQQESWSRSQVAASAAKSIAKASEELNKMKSVASSEKLDGDDVEGGRPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEGMMESLFGCGATSSTPKETVTRKSVIPPVEQENRVLDPKKSQNIAIMLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKSYDAGVSKLGSAERFLKTVLDIPLAFKRVEAMLYRANFDTEVNYLRKSFQTLETASEELKNSRLFLKLLEAVLRTGNRMNVGTYRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRTEGSSGESSSKNAQAEMNSQFNDDEFRKKGLQVVAGLSRDLGNVKNAAGMDSEVLSSYVSKLESGLDKVRLVLQHEKPGMQGNFFNSMKLFLKVAEAKIVTIKSDERKALFLVKEVTEYFHGNMAKEEAHPFRIFMIVRDFLNILDQVCKEVGKMQDKTVISSARSFRIAASASLPVLNRYHARQDTTSSDEESSSP* | 903 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo11g0989 | 902 | Pfam | Formin Homology 2 Domain | 459 | 850 | IPR015425 | - | |
| Amo11g0989 | 902 | MobiDBLite | consensus disorder prediction | 61 | 97 | - | - | |
| Amo11g0989 | 902 | Gene3D | Formin, FH2 domain | 453 | 862 | IPR042201 | - | |
| Amo11g0989 | 902 | PANTHER | FORMIN-RELATED | 7 | 902 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
| Amo11g0989 | 902 | SMART | it6_source | 452 | 865 | IPR015425 | - | |
| Amo11g0989 | 902 | MobiDBLite | consensus disorder prediction | 189 | 214 | - | - | |
| Amo11g0989 | 902 | MobiDBLite | consensus disorder prediction | 188 | 419 | - | - | |
| Amo11g0989 | 902 | MobiDBLite | consensus disorder prediction | 371 | 389 | - | - | |
| Amo11g0989 | 902 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 374 | 864 | - | - | |
| Amo11g0989 | 902 | MobiDBLite | consensus disorder prediction | 333 | 348 | - | - |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo11g0989 | - | - | gmx:100803578 | 976.852 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo11g0989 | 11 | 28700155 | 28704510 | Amo11g0989 | 11 | 28700155 | 28704510 | ECH | |
| Amo05g0591 | 05 | 6823648 | 6828591 | Amo11g0989 | 11 | 28700155 | 28704510 | PCT | |
| Amo11g0989 | 11 | 28700155 | 28704510 | Amo05g0591 | 05 | 6823648 | 6828591 | PCT | |
| Amo11g0989 | 11 | 28700155 | 28704510 | Amo09g1061 | 09 | 24988927 | 24996832 | PCT |
Showing 1 to 4 of 4 entries