Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0987 ATGGGCACCATCACATCCATTAACGCCTTGCTCTTATTCATGCTATCTACTTTCTTGCTTTTTTACTTCCCATATTTCGCCATCGGCAAAGATGAGGCCGGGCGGCAAAGACAAGCATTGGAGATTATCATAGGACCAGGCGGCCCTGGTTATTATTATCCTGGCCCTGCTCCTTCACCCGAATGTCCCCCTCCTCTTCCTCCTCTTCCTCCTCCTCCCAAACCGGCATGTCCCCCTCCTCTTCCTCCACCACCGCCACCACCACCACCACCACCTCCTCCTCCTCCACCTCCACCTCCACCACCAGCAGCGTGTCCCACATCATCTCCTCCTCCGCCGCTGCCTCCACTTCCGACGTGTCCCCCTCCATTACCACCACCACCACCACCACCTCCACCACCTACTTGTCCCCCTCCATCACCGCCGCCGCGTCCTCCTCCGCCACCACCACCACCACCACCTCCTCGTCCTCCTCCACAGACACGGTTGATAAGAGCACGAGGAGTACTTCTAAAATTCAAGAAATTTGAAATCGTTGACAAAACAGGGTACACTAATAACTGGAAAGGCTCAYATCCATGCAAGTACAAMGGGATAAGGTGCGCCACATATCCAAACWCAAAGGAGAKAGCTGTGGCCGGAATAGACCTCAACCAAGCCAAGATCACCGGTGTTAAAAACGGAACATTGAAGCTTTCCGATGTCTTGGGCGAAATTCCAGAGCTCACATTCTTCCACGTTAACTCTAACGGCTTCGGCGGCAACCTCCCAGACTTATCCGTTAATAAGTTCAAGTATTTCTACGAACTTGACCTCAGCAACAACAAGCTCTCAGGTGCGTTCCCAATACAAGTTCTTCAGGCTACCAATCTAACATTCCTGGACATTAGGTTCAACCAACTCTCCGGCCCAATTCCACCGGAACTCTTCGTCCAAGATCTCGATGTTATCTTCATCAACAATAACTTGTTCTCCGGCAACCTCCCTAGTAATTTCGGCTCAACTCCTGCCAGGTACCTCACGTTCGCCAACAATCAATTTAGCGGCACGATCCCAAGCAGCATTGGTAAAGCTTCGAAGACGCTAACCGAAGTGCTGTTCTTGGGGAACAACCTTGACGGGTGCCTGCCCTACGAGATAGGCTTGCTCGGCAAGGCGACAGTCTTTGATGCGAGCAAAAACATCATTACGGGTCCCATTCCTCACTCTTTCGGATGCTTAAAAAGCATTCAGTTCCTCAACCTTGCAAGCAACCAGCTGTATGGTCCAGTTCCGGAGATCGTCTGCATTCTCCCGGGGCTCCGCAACAACGGCAACTTGTCGTTGTCGGACAACTACTTTACCCAAGTTGGTCCTGAGTGCTTGAAGCTGATAGAGAGCAAGGTTCTTGACGTCAACAATAACTGCATCTTGGGGCTTCCTAATCAAAGATCACCGGAAGAATGCCACATGTTCTTTTCCAATGCGAAACCATGCTCTAACCCCAAATCTTTCCATTACATCCCTTGCAAACCGTACTACTCGCAGTTACACTCCCAAGCCGTGGCGCCGCCGCTGCTTCAAGAAGATAGTTCTTTCTATTCTTCACCGCCTGAGCCGGTAACCTATAAGACTCTCAGACCTCATCGCTTATGA 1635 0.5095 MGTITSINALLLFMLSTFLLFYFPYFAIGKDEAGRQRQALEIIIGPGGPGYYYPGPAPSPECPPPLPPLPPPPKPACPPPLPPPPPPPPPPPPPPPPPPPPPAACPTSSPPPPLPPLPTCPPPLPPPPPPPPPPTCPPPSPPPRPPPPPPPPPPPRPPPQTRLIRARGVLLKFKKFEIVDKTGYTNNWKGSXPCKYXGIRCATYPNXKEXAVAGIDLNQAKITGVKNGTLKLSDVLGEIPELTFFHVNSNGFGGNLPDLSVNKFKYFYELDLSNNKLSGAFPIQVLQATNLTFLDIRFNQLSGPIPPELFVQDLDVIFINNNLFSGNLPSNFGSTPARYLTFANNQFSGTIPSSIGKASKTLTEVLFLGNNLDGCLPYEIGLLGKATVFDASKNIITGPIPHSFGCLKSIQFLNLASNQLYGPVPEIVCILPGLRNNGNLSLSDNYFTQVGPECLKLIESKVLDVNNNCILGLPNQRSPEECHMFFSNAKPCSNPKSFHYIPCKPYYSQLHSQAVAPPLLQEDSSFYSSPPEPVTYKTLRPHRL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0987 544 Gene3D Ribonuclease Inhibitor 337 498 IPR032675 -
Amo11g0987 544 SUPERFAMILY L domain-like 193 473 - -
Amo11g0987 544 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 515 - -
Amo11g0987 544 PANTHER BNAC05G26270D PROTEIN 17 515 - -
Amo11g0987 544 MobiDBLite consensus disorder prediction 54 162 - -
Amo11g0987 544 PRINTS Proline rich extensin signature 63 79 - -
Amo11g0987 544 PRINTS Proline rich extensin signature 83 95 - -
Amo11g0987 544 PRINTS Proline rich extensin signature 48 60 - -
Amo11g0987 544 PRINTS Proline rich extensin signature 95 116 - -
Amo11g0987 544 MobiDBLite consensus disorder prediction 54 161 - -
Amo11g0987 544 Gene3D Ribonuclease Inhibitor 165 336 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0987 Amo-Chr11 28661910 28664252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0987 162 487 Leucine-rich Repeat extension Gene Families AT4G13340 44.954 3.64e-80 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0987 - - ahf:112800345 767.689