Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0980 ATGAGTAAAGATAAGGATCTTCATGACTATGCGATCAAAGGCCAACCTTACCTATTGGGTTGTTCAACTAGCAAGATGAGGTCGATGCTGGATCAGTTGGTTGATCTTGGAGTTAAGGGAAATAAGTTAGGCAAGGTTATTGCTAGAAGCCCGCAGCTACTATTGCAAAAGTCTAGAGATTTTCTACAGTTTATCTTCCTCGGATAA 207 0.4058 MSKDKDLHDYAIKGQPYLLGCSTSKMRSMLDQLVDLGVKGNKLGKVIARSPQLLLQKSRDFLQFIFLG* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0980 68 Pfam mTERF 2 54 IPR003690 GO:0003690|GO:0006355
Amo11g0980 68 Gene3D Transcription termination factor 3, mitochondrial 3 66 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0980 Amo-Chr11 28432205 28433429 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo11g0980 mTERF 3.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0980 K15032 - gmx:100802127 76.6405