Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0935 ATGGATGATTCAATCTCAGATTGTCAGCTGAATCAGGGTAAAGTGGATTTTGAATTTGAATTTAACGAAGTTCCTGAGCCTCTCTCTGTTGTTGATGACCAGTTTGTTCTCAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGAAAAATTTTACAGGAACTATGCCAAGGCTACAGATTTTTCTACAAGAGTTCAGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGTAGAGAGGAAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACAAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCGCACCCTTGCTGTCCAAGTAAAGCAAAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCTGGTATTAGACCAAGCAAAACTTACCAATCA 519 0.3988 MDDSISDCQLNQGKVDFEFEFNEVPEPLSVVDDQFVLKVGMTFTTLEDAEKFYRNYAKATDFSTRVQSTNRKGNEIKNQLITCSREEKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAKMLKQHRELSMSIRRTIENNEEAGIRPSKTYQS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0935 173 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 38 156 - -
Amo11g0935 173 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0935 Amo-Chr11 27024810 27025668 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g0935 FAR1 8e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0935 - - adu:110280446 311.227