Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0929 ATGGATTTACTAAGTGGTCGCAAAGCAAATGAGATTTTTGAAGGGCAAGTTCATGTGTACAAACACATGTATGCTTACTTAGATTCTATGTGCCTTAAATGGTGCATTGATTTAGAAATACCAACCATAATCTACAACCATGGAAAACCCATCACCCTTCATGAATTGATCTCAATTTTACAAGTTCCACCATCCAAAATTAGTGGTGTGGAACGTCTTATGCGCCACCTAAGTCACAATGGATTCTTTGATATTGTAACAATCAATGATGATGATGATGAAAACAAAGAAGAAAAAGAAGCATATGCTCTCACAATTTCTTCTGAGCTTCTTGTTAAAGGCACTGAATATTGTTTAACTCCAATGGCTAAGTTTTTTCTTGATCCATCTGTGTCAAGTTCTTATAACTTACTAGGAAAATGGACTTTAGAAGAAAATCTTAGTTTATCTGAAATTTCCCTTGGAACAAATCATTGGGACTTTCTTAGCAAAAACCCTTCAATTTTGACTTCCTTTAATGAGTCAATGGCTAGTGACTCTCAAATGGTGAAGTTGGCATTCAAAGATCATAGTGCTGTCTTTGAAGGGTTGGAATCCATTGTAGATGTTGGTGGTGGAAATGGAACCATATCTAAGACTATTAGTGACATGTTTCCCAAATTGAAGTGCATAGTGTTTGACCTTCCACATGTTGTGGAGAATTTTTCAGGAACCAGCAGCAACAATTTGAGCTTTTGGATTCTACATGATTGGGATGATGAAGATTGTGTAAAGATATTGAAGAAATGCAAAGATGCAATTTCAAAGAATACTAAAGGAGGAAAAGCAATTATCATAGATTATGTGATAAATGAAAAACAAGATGAATTTGGACTTACTCAAATGAAGCTCAGAATGGATATTGCCATGACAAGTGTGAATGGAAAGGAGAGAAGTGAAGAGGAAATCAAGAAGCTTTTTTTGGAAGCAGGCTTTCAAGATTATAAAATATTTCCTTTAACCGGAATGTATTCTCTTATTGTGGTTTATCCATAA 1035 0.3488 MDLLSGRKANEIFEGQVHVYKHMYAYLDSMCLKWCIDLEIPTIIYNHGKPITLHELISILQVPPSKISGVERLMRHLSHNGFFDIVTINDDDDENKEEKEAYALTISSELLVKGTEYCLTPMAKFFLDPSVSSSYNLLGKWTLEENLSLSEISLGTNHWDFLSKNPSILTSFNESMASDSQMVKLAFKDHSAVFEGLESIVDVGGGNGTISKTISDMFPKLKCIVFDLPHVVENFSGTSSNNLSFWILHDWDDEDCVKILKKCKDAISKNTKGGKAIIIDYVINEKQDEFGLTQMKLRMDIAMTSVNGKERSEEEIKKLFLEAGFQDYKIFPLTGMYSLIVVYP* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0929 344 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 342 IPR029063 -
Amo11g0929 344 Pfam O-methyltransferase domain 152 234 IPR001077 GO:0008171
Amo11g0929 344 Pfam O-methyltransferase domain 246 326 IPR001077 GO:0008171
Amo11g0929 344 PIRSF O-mtase 1 245 IPR016461 GO:0008168
Amo11g0929 344 PIRSF O-mtase 241 344 IPR016461 GO:0008168
Amo11g0929 344 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Amo11g0929 344 Gene3D Vaccinia Virus protein VP39 244 344 IPR029063 -
Amo11g0929 344 Gene3D Vaccinia Virus protein VP39 112 243 IPR029063 -
Amo11g0929 344 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 343 - -
Amo11g0929 344 SUPERFAMILY "Winged helix" DNA-binding domain 10 114 IPR036390 -
Amo11g0929 344 PANTHER O-METHYLTRANSFERASE 4 343 IPR016461 GO:0008168
Amo11g0929 344 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 344 IPR016461 GO:0008168
Amo11g0929 344 Gene3D - 5 111 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0929 Amo-Chr11 26680126 26682208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0929 30 330 Monolignol Biosynthesis Gene Families AT5G54160 27.414 6.65e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0929 K22588 K13262 gmx:100813225 414.846