Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0915 ATGTGTCATTTTCCGGATCGATCGGTGGCATTCTTGTTTTACAGTTTGTATGCGAAGATGAATGGTTTCACTGTGAGGAAGAATAAGATTTGGCGAAATGTGAGGAATGAGGTTACTCAACAAGAATTTGTATGTTTCCGGCATAGGTTCAGAGGAATCGGGTCCGTTAACGACGGCAAGCGACAAAAACGTGAGCCAAAGGCGGAGACCAGATGCGGCTGTGAGGCAGAGATGCGCGTCCACGTGCACTCCGATAGTGGTAGATGGATAATATCATACTTTCAGGACGTTCACAACCACGAGTTGCTGGACGATAGACTGACTTTCATGCTACCGGGCCATAGGAAAATGGATGCAGCCGCCGTGGAACAAATGAACATGATGCTTAGAGTTGGGATTAAAACGCCACATATTTATTCATCTTTTGTGCAGACTGCCGGGGGATTCCAAAACCTTCCATTTCTAAAGAGGGATATGTCCAGGGAAGCACACTCTGATATGTTATCCGTGGTTGGGGAACCAAGGTCAGCTGCAAAGAAGCTCACAAGGGCAATTTTCTTAAACTTCAGGCCCATGCTTTTCTACGCTTGCACACTGAAGGTACGAACACACACATGGAGCCAGACTTCTGATACATTCACTTTGTCTAGGTCAGCTAATGCGCGTAGGGAGTGGCAAGTGTGTCACTATGGTGACAGTAACAGTTTCAAGTGCTCTTGCTTGCGAATGGAGTCCCTTGGTATACCGTGTGATCACATTGTAGCAGTGCTGGTACATTTGGAGATGACTGACATACCAGACAGTCTTGTTCTGGATCGTTGGTCCAAGAGTGCTCGCTCGAAAGTAAGGGCCTTTGTGGAGAAAGGTCCATTTTGCTGGGATTCAACGATCATTGCCGCAATTGGATGTTGA 912 0.4682 MCHFPDRSVAFLFYSLYAKMNGFTVRKNKIWRNVRNEVTQQEFVCFRHRFRGIGSVNDGKRQKREPKAETRCGCEAEMRVHVHSDSGRWIISYFQDVHNHELLDDRLTFMLPGHRKMDAAAVEQMNMMLRVGIKTPHIYSSFVQTAGGFQNLPFLKRDMSREAHSDMLSVVGEPRSAAKKLTRAIFLNFRPMLFYACTLKVRTHTWSQTSDTFTLSRSANARREWQVCHYGDSNSFKCSCLRMESLGIPCDHIVAVLVHLEMTDIPDSLVLDRWSKSARSKVRAFVEKGPFCWDSTIIAAIGC* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0915 303 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 177 282 IPR031052 GO:0006355
Amo11g0915 303 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 158 IPR031052 GO:0006355
Amo11g0915 303 ProSiteProfiles Zinc finger SWIM-type profile. 213 261 IPR007527 GO:0008270
Amo11g0915 303 Pfam FAR1 DNA-binding domain 13 103 IPR004330 -
Amo11g0915 303 PANTHER OS04G0354200 PROTEIN 4 158 - -
Amo11g0915 303 Pfam SWIM zinc finger 237 260 IPR007527 GO:0008270
Amo11g0915 303 SMART 26again6 236 263 IPR006564 GO:0008270
Amo11g0915 303 PANTHER OS04G0354200 PROTEIN 177 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0915 Amo-Chr11 26410996 26412728 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g0915 FAR1 8.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0915 - - aip:107633557 304.679