Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0903 ATGGAGGTAGCTGTTCCTAGACAACAACAGTCAAATCAACAGACTGAGGATAATCTACAGTACTCAAGATACTCAAGAACTTTCCGGAATTCAAAGAGAAAGGCCGAGGAGAATATTGTTAACGGGAGTGATGAGGAGCCAGAGCCAGAAGAGGGAGTAAAAACTATGGGAACTCTGGAGAGGAGTTCTTTGGTAGGAATGGAGGTTCCATTTGTGAAACAAGAACAATCAAATAAGCTTATTGGCAAAAGTGCACACAAAACCTCAAAATATTCTAGAACTTCTGGTGTTTTGAAGAAAAGAAAGGTTCAAGAAAATCACAAGCATGATTTTACGGAACCAAAGTCAGAAGGGAAAAAAGACCTTCTGTTCAGTTCAAACAGGACTACCAGGAAGGTAGATGAACCAAAGAAATTCAACACCTCAAATAAGAATGACCAATATGAAGATGGTCTCTTGATTGACGATTTGGATGATGATGATGAAATGCTTTTCCTTCTAAAGACAAAGTACACAAGAAGGGCTAGAAGAATGGATGATAATACTACGGTTGTTGAACAGAATCCCCGGAAATGTCATCAATGCTTGAAGAAGGAGAGAACAACATTTGTGCCTTGTTCTAAATGTAGGAAAATGTACTGTCTGCGGTGCATCAACCAGTGGTACCCTGATATGTCAGTAGAAGAAATTGCTGAAAGTTGCCCATGTTGCCGCAATAATTGCAATTGCAATGTTTGTTTGTGTTCAAGAGGAACAATTAAGACATCTACCAAGGACATAACTGACACCGAAAGGGTTCAGCATCTACATTATACGATTAGCTTACTTGTTCCTTTTCTGAAACAAATTCGTCATGAACAGAGTCAAGAGGAAGAGATTGAAGCTAAAATACAAGGGTGTGATATTGAGATACCGCAGAGTCTTTGTGGCGACAATGAACGTGTCTATTGTGATCATTGTGCCACTTCAATTGTTGACCTTCATCGAAACTGCCCCAATTGTTCCTTTGAACTTTGCCTAAGTTGTTGCCAAGAAATTCGCAATCGAAGCATCACATCACGGGCTGAGATGAAGTTCCAGTATGTGAATAGAGGATATGATTATATGCATGGTGGTGATCCTCTTCTAGTATCCCCGGTTCTAGAGGCCCCAAATGGTCATATTCAGCTATCTTCATTGTGGAATGCGGATAGTGATGGAAGGATCCCTTGTGCACCGAAGGAGGTTGGGGGTTGTGGTAGTTCTATATTAGAGCTGAGGTGTATCCTACCTCGTGGATGGCTATCTAAATTGGAAGCTAAAGCGCATGAGATGCTGAGGTTTTGTGAAATGGAACAAAAAATAGTTCAACAGAAAGGAGCAGCATCAAGTTATAACTTAATGAGAAGGGCAGCATTCCGAGAAGGAACAAATGATAATAACATATACTGTCCAGAGTCAGGAGACATTTCAAAAGAAAGCTTCTTGTTATTTCAAAAGCACTGGTCTAATGGTGAACCAGTTATAGTTCGTGATGTTCTAACACAGGGAACTGGTCTGAGCTGGGAGCCAATGGTCATGTGGCGAGTATTATGTGAAAGTTCAGCTTCAGACATCAGCTCAAAAATGTCAGAAGTGAAGGCCATGGATTGCCTAGCTGGTTGTGAGGTAGAAATTAATACTCATAAGTTCTTTAAAGGTTATACTGGGGGAAGAACATATCGAAATCTGTGGCCAGAGATGCTCAAGCTAAAAGATTGGCCCCCATCGGATAAATTTGAAGATCTTCTGCCCCGCCATTGTGATGAGTTTATACGTTGCTTGCCATTTCAGGAGTATAGTGACCCTCGTAATGGAATTATCAATCTTGCTGTAAAATTGCCAGCCCATGTCCTAAAACCTGACATGGGTCCGAAAACATATATAGCTTATGGAATTAAAGAAGAACTTGGTAGAGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTGAATATTTTGACACATACAGCTGAGGTAACACTGAGTGGTGAACAGTACTCTGTTATTTCAAAGCTGAAAGAAGCACATGCAGCACAAGATGAGGAAGAACACTGGTCGGAAGAGAGGGATTCTGAGTGCCCAAGTGTTCAACCTTGCAAAGATGACAGAAAACAGATAGAAGATAAAGCAGCAGTAAGCCCCCAAGATATCAAGAAGTGCCCTATTGAAATGAATGGAACAGTCTTTCCACTTGACAAGTCTAAGGAGGCCGATTCCCCTGCCATCTCTAACGAAGATGAAACCGGAGAAACAGGTGGTGCTCTATGGGATATCTTTCGTAGAGAGGATGTTGAAAAGTTAGAAACATATCTAAGGAAACATTCAAAAGAATTTAGACACACTTATTGCTGTCCGGTTGAACAGGTTGTCCATCCTATTCACGACCAATGTTTTTATCTGAATATGGAGCACAAAAGGAAGTTGAAGGAGGAGTTTGGTATAGAGCCATGGACATTTGAGCAGAAGCTTGGGGAAGCAGTGTTTATTCCTGCTGGATGCCCGCACCAAGTGAGAAATCTCAAGTCATGTACAAAAGTTGCTGTAGACTTTGTGTCGCCGGAAAATATCCATGAGTGTCTGCGTTTAACTAACGAGTTCCGTAAGCTTCCGAAGAACCACAAAGCTCGTGAAGATAAACTTGAGATAAAGAAGATGATAGTGTATGCACTTGATCAAGCGCTGAAAGACCTGAAAGCTTTGGTCATGTGTTCTTGA 2745 0.4124 MEVAVPRQQQSNQQTEDNLQYSRYSRTFRNSKRKAEENIVNGSDEEPEPEEGVKTMGTLERSSLVGMEVPFVKQEQSNKLIGKSAHKTSKYSRTSGVLKKRKVQENHKHDFTEPKSEGKKDLLFSSNRTTRKVDEPKKFNTSNKNDQYEDGLLIDDLDDDDEMLFLLKTKYTRRARRMDDNTTVVEQNPRKCHQCLKKERTTFVPCSKCRKMYCLRCINQWYPDMSVEEIAESCPCCRNNCNCNVCLCSRGTIKTSTKDITDTERVQHLHYTISLLVPFLKQIRHEQSQEEEIEAKIQGCDIEIPQSLCGDNERVYCDHCATSIVDLHRNCPNCSFELCLSCCQEIRNRSITSRAEMKFQYVNRGYDYMHGGDPLLVSPVLEAPNGHIQLSSLWNADSDGRIPCAPKEVGGCGSSILELRCILPRGWLSKLEAKAHEMLRFCEMEQKIVQQKGAASSYNLMRRAAFREGTNDNNIYCPESGDISKESFLLFQKHWSNGEPVIVRDVLTQGTGLSWEPMVMWRVLCESSASDISSKMSEVKAMDCLAGCEVEINTHKFFKGYTGGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRCLPFQEYSDPRNGIINLAVKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVTLSGEQYSVISKLKEAHAAQDEEEHWSEERDSECPSVQPCKDDRKQIEDKAAVSPQDIKKCPIEMNGTVFPLDKSKEADSPAISNEDETGETGGALWDIFRREDVEKLETYLRKHSKEFRHTYCCPVEQVVHPIHDQCFYLNMEHKRKLKEEFGIEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTNEFRKLPKNHKAREDKLEIKKMIVYALDQALKDLKALVMCS* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0903 914 ProSiteProfiles JmjC domain profile. 609 877 IPR003347 -
Amo11g0903 914 ProSiteProfiles Zinc finger RING-type profile. 192 238 IPR001841 -
Amo11g0903 914 CDD cupin_RmlC-like 801 861 - -
Amo11g0903 914 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 1 913 - -
Amo11g0903 914 SMART cupin_9 590 877 IPR003347 -
Amo11g0903 914 MobiDBLite consensus disorder prediction 1 26 - -
Amo11g0903 914 MobiDBLite consensus disorder prediction 29 55 - -
Amo11g0903 914 MobiDBLite consensus disorder prediction 98 144 - -
Amo11g0903 914 MobiDBLite consensus disorder prediction 689 709 - -
Amo11g0903 914 SUPERFAMILY Clavaminate synthase-like 487 901 - -
Amo11g0903 914 MobiDBLite consensus disorder prediction 78 144 - -
Amo11g0903 914 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 913 IPR045109 GO:0032454|GO:0033169
Amo11g0903 914 Pfam JmjC domain, hydroxylase 762 860 IPR003347 -
Amo11g0903 914 MobiDBLite consensus disorder prediction 78 92 - -
Amo11g0903 914 MobiDBLite consensus disorder prediction 1 61 - -
Amo11g0903 914 Gene3D Cupin 474 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0903 Amo-Chr11 24883334 24889105 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Amo11g0903 JmjC 7.8e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0903 K15601 K21989 gmx:100797860 1209.13