Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0890 ATGGAGTTTTCAACCCCGATGGGCAGATCGAACAACACAGTAACCAATTCAACACAAGGTAATGAAGAATTGAGTGCGGGTGAAGTTGTTATTCAAGAGCAAGAGGGGTCTAAGGTATATTACATGGGATTCATAGGAATGAGTTTTGATTCGTTGCATTTGGCACAGGAGTTTTATGCAAATTATGCAAAGAAAGTGGGGTTCGTAACTAAAGACAGGAACACGAACTTCGACAAGACGCGGAAGGAATCAAAGATACCTGTTAATCAATCTCTTCACTACACTCGAGAGGGTTATCGGGAATCTCGAGTTAAGGCAGCAACTCGGGCAAACAGAATAACAGCCACAAGATGCAGAGCAAGGATGTATGTCATGCTGGACAGGGAGAAGGAATGTTGGGTTTTGTCTAGGTTAGAATTGAGGCATTCTCACCCCCTGTTCGACTAA 447 0.434 MEFSTPMGRSNNTVTNSTQGNEELSAGEVVIQEQEGSKVYYMGFIGMSFDSLHLAQEFYANYAKKVGFVTKDRNTNFDKTRKESKIPVNQSLHYTREGYRESRVKAATRANRITATRCRARMYVMLDREKECWVLSRLELRHSHPLFD* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0890 148 Pfam FAR1 DNA-binding domain 57 147 IPR004330 -
Amo11g0890 148 MobiDBLite consensus disorder prediction 1 25 - -
Amo11g0890 148 MobiDBLite consensus disorder prediction 1 26 - -
Amo11g0890 148 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 146 - -
Amo11g0890 148 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 16 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0890 Amo-Chr11 24553122 24557716 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g0890 FAR1 8.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0890 - K17604 adu:107458165 204.527