Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0848 ATGCCTCCAACTCCACAAGAACACGAGCAACCGCTCTTACTGGACTCACCGCAACAAGCCGATGAGTTCGAGGAAACAGCCTACGATTCTTCCGAGAAGATCGTGGTAGTTGGAATCGACGAGTCAGAGTACGAGTCCGGGAACTGGGCCCGGGCCCCGCCGTTCTCATGGAGGAAGCTATGGCTATTCACGGGCCCGGGCTTTCTCATGAGCATAGCGTTCTTGGACCCAGGGAACCTGGAAGGAGACCTGCAGGCCGGTGCCATTGCGGGGTACTCGCTGCTGTGGCTGCTCATGTGGGCCACAGCCATGGGCCTGCTGATCCAGCTGCTGTCGGCCCGGCTCGGCGTGGCAACGGGCAGGCACCTCGCGGAGCTTTGTCGGGAGGAGTACCCGACGTGGGCTCGGAACGTGCTGTGGGTTATGGCTGAGGTGGCACTTATTGGTTCTGATATTCAGGAGGTTATTGGTAGTGCTATTGCTATAAGGATCCTTAGTAATGGCTTTGTGCCTCTTTGGGCTGGAGTCACCATAACTGCTCTTGATTGTTTTGTTTTTCTTCTTCTGGAGAATTATGGTGTGCGGAAACTGGAAGCTGTTTTTGCTGTTCTCATTGCGATAATGGCGGTTGCCTTTGCATGGATGTTTGGTGAAACAAAGCCCAGTGGCAAGGAATTGCTTCTTGGTATTTTGATTCCGAAGCTTAGCTCTAGAACTATACAGCAGGCTGTTGGAGTTGTGGGCTGCATTATTATGCCTCATAATGTGTTCTTGCACTCTGCGCTTGTTCAATCAAGGAGGGTTGATCATCGGAATAAAGGCCGAGTTCAAGAAGCTCTTAATTATTACTCAATAGAGTCCACCATGGCCCTTATAGTCTCCTTTGTTATTAATATATTTGTCACAACCGTTTTTGCTAAGGGGTTCTATGGTACCGAACTAGCAAACAACATTGGTCTTGTAAATGCAGGACAGTATCTTCAGGAGCAGTATGGGGGTGGATTATTTCCAATACTGTATATATGGGGTATTGGGTTATTAGCAGCAGGACAAAGTAGCACTCTTACGGGTACCTATGCAGGTCAATTTATCATGGGGGGTTTCCTAAATTTAAGGTTGAAAAAATGGATGAGAGCACTAATTACACGAAGTTTTGCAATTATTCCAACTATGATAGTTGCTCTTATTTTCGACACCTCTGAGCAATCGTTAGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTTCAAATCCCCTTTGCACTTATTCCCTTGCTTTGTTTGGTGTCAAAGGAGCAGATAATGGGAAGTTTCAGAATTGGCCCCGTCCTCCAGGTATATATGATCCTCTCATCTCCACTTTGA 1368 0.4766 MPPTPQEHEQPLLLDSPQQADEFEETAYDSSEKIVVVGIDESEYESGNWARAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARNVLWVMAEVALIGSDIQEVIGSAIAIRILSNGFVPLWAGVTITALDCFVFLLLENYGVRKLEAVFAVLIAIMAVAFAWMFGETKPSGKELLLGILIPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRRVDHRNKGRVQEALNYYSIESTMALIVSFVINIFVTTVFAKGFYGTELANNIGLVNAGQYLQEQYGGGLFPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALIFDTSEQSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLQVYMILSSPL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0848 455 Hamap Divalent metal cation transporter MntH [mntH]. 46 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 58 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 19 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 PRINTS Natural resistance-associated macrophage protein signature 194 215 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 PRINTS Natural resistance-associated macrophage protein signature 412 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 PRINTS Natural resistance-associated macrophage protein signature 378 395 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 PRINTS Natural resistance-associated macrophage protein signature 139 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 PRINTS Natural resistance-associated macrophage protein signature 169 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 PRINTS Natural resistance-associated macrophage protein signature 350 369 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 PRINTS Natural resistance-associated macrophage protein signature 243 266 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 Pfam Natural resistance-associated macrophage protein 81 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo11g0848 455 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 19 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0848 Amo-Chr11 19662407 19664989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0848 21 446 Inorganic Solute Cotransporters AT1G47240 81.455 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0848 K21398 - gmx:100812381 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0848 11 19662407 19664989 Amo11g0848 11 19662407 19664989 ECH
Amo05g0640 05 7531207 7534508 Amo11g0848 11 19662407 19664989 PCT
Amo11g0848 11 19662407 19664989 Amo05g0640 05 7531207 7534508 PCT