Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0838 ATGGCAATTCATCATCAGTTTTACACAATTCAACACTCTCTGCCTTTACTGCTACTACTTGTTATTCAGCTCTCATCACTTCAGTTCCACTCCCATGGGTATGATTCCCAAACAAAGTACTTCATCAATTGCGGATCGAGCAGCAATGCTAAGGACACCGAGAGTGGGAAAACTTACGTTGGGGATTCAAGCCAGGTCAGTTATAGCAAGGGGAGCAAAACAGAATCCAACCAATCATCAGTTCCTTCACCTATCTACCAATCCGCAAGAATCTTCCCAAGTCAATCTTTCTATGAGTTCCCAATTGACACCGCTGGCACCTCCATAATACGCCTTCATTTCCTTGCTTTCACTTCGCCTAGCAACCTCTCTTCTGCAACGTTCAATGTCTCGGTTCCTAATTTCATGCTGCTGCAAAACTTCACGCCCAAGAACTATACAAAATCTCCTCTTGTTAAAGAGTATTACGTGAAGATATCTCTTGGTAAATTCAGAATCACTTTCGACCCTCTCCCTTCCTCGTTTGCCTTTGTGAATGCCATAGAAGTCTTCCTACTCCCCCGCTTCTTAATCGCTGATAAGGTCTCAGGTTTTGATCCACAACCTGCCATTGGACAAAATAGTTTGTCTAGTTATAGTGGGGTACTCACGCGAGCGTTGGAGACCAAACACAGGCTCAACGTCGGTGGCACTAATATCACAAGTGGCGTAGATCCCTTGTGGAGAACCTGGTCTTTTGATGATACTTACCTTGTTAATAGTCAAAATGCCAAAAATTTTACATATAATGGGAGCATTAAGTCCAAGGTAACTCCTGATTCTGATGGTCCAAATGCTAATATGTATACTGCGCCATTAGATTATGTTTATGGAACAGCTAAAGTGGTTAATGATTCCAACATAACCTGGAGTCTTCCTGTAGACAAGAATGTAGACCACCTAATTCGGTTTCACTTCTGTGACCTTTGGTCTATACAGGGTGACCTTACCACATTTGGCCTGTACATTTATGACCTGCCCGCTTTGGTCATTAATAACGACACGAATGTGTCTTCACAATTGCCGGCGCCTTTTTATTATGATCTTGTGGTCCAATCTGATAACTCTGGCCTTTTTCTGATCACTGTTGAGCCTAATAGTTCTGCTTTGGTTCCTAGAGCCTTTTTGAATGGTCTAGAAATAATGCGAATGGTTGATTCATCAGATTTGAGTTACTTGCAAGACCATTCCAATGGAAAGGCTAGTGTTCTTCCGGTGGTGCTGGGCTCAGTAATTGGAGGTTTGGTCCTGGTTGCATTGGTTGTTATTGTGTTAGTTTGGCGTCTTAAGACCAACAAACAAAAGCCGGTGGAGGGTTCAGATTGGTTGCCAATTCCTGCCACGGCAGGAGGAAGTTCTCACAGCAGAACAAGCCGGTTGACTGATGGAACCATTCAAGGCTCTCCGCTTCGCAACATTAATCTAGGACTGAAGGTTCCTCTGCAGGATCTTCAATTGGCAACCAAGAACTTCGACGAGAAGCAGATAATTGGCAAGGGCGGTTTTGGAATTGTCTACAAGGGAGTTCTCAAGAACGGCATGAAAGTAGCAGTTAAGAGGAGTGAGCCAGGGTCCGGTCAGGGCCTTCCGGAGTTCCAGACTGAGATCATGGTTTTGTCCAAAATTCGCCACAGGCACCTCGTTTCCTTGATCGGCTACTGCGACGAAAGGTACGAGATGATACTGGTTTACGAGTACATGGACAAAGGGACATTGAGGGACCATTTGTACAATACAAAACTGCCAAGCTTGACTTGGAAGCAAAGGCTTGAAATTTGCATTGGAGCCGCAAGAGGCCTTCAGTACCTTCACAAAGGCGCGTCCGGGGGAATCATTCACCGGGATGTTAAATCCACCAACATTCTCCTTGATGAGAATCTTGTGGCTAAAGTTGCTGATTTCGGCCTTTCGAGAACAGGTCCTCTTGACCAGCATTCCTATGTCAGCACAGGTGTTAAAGGAACTTTTGGTTATCTTGATCCGGAGTATTTCAGGTCGCAGCAGCTGACAGAAAAATCTGATGTCTATTCATTTGGTGTAGTTCTTCTGGAAGTGTTATGTGCCAGGCCGGCTATCGAACCTTCGCTCCCAAGGGAGCAAGTGAACTTGGCTGAGTGGGGAATCCTCTGCAAAAACAAAGGGATTCTAGAAGACATCATTGATCCCACCATCAAAGGCCAATTAGATCAAAACTCGTTCAGGAAGTTTAGCGAGACAATAGAAAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGGTGATGTGTTGTGGGACTTGGAGTATGCACTGCAGCTTCAGCGCGGCGCAATACACAGAGAGCCGCATGAGGATAGTTCTAGCAGTGCTTCTGGATCGCTTCAGTTGCCCAATGTTAGGCGTCTTCCTTCGCTGTCCACCTTGAGCGAAGTGGATGACATGTCCATTGCAATGGGTGATCGGTCTGATACAGCAGACGATTCAGTTTTTTCTCAGTTGAAAATCGATGAAGCTAGATAA 2541 0.4514 MAIHHQFYTIQHSLPLLLLLVIQLSSLQFHSHGYDSQTKYFINCGSSSNAKDTESGKTYVGDSSQVSYSKGSKTESNQSSVPSPIYQSARIFPSQSFYEFPIDTAGTSIIRLHFLAFTSPSNLSSATFNVSVPNFMLLQNFTPKNYTKSPLVKEYYVKISLGKFRITFDPLPSSFAFVNAIEVFLLPRFLIADKVSGFDPQPAIGQNSLSSYSGVLTRALETKHRLNVGGTNITSGVDPLWRTWSFDDTYLVNSQNAKNFTYNGSIKSKVTPDSDGPNANMYTAPLDYVYGTAKVVNDSNITWSLPVDKNVDHLIRFHFCDLWSIQGDLTTFGLYIYDLPALVINNDTNVSSQLPAPFYYDLVVQSDNSGLFLITVEPNSSALVPRAFLNGLEIMRMVDSSDLSYLQDHSNGKASVLPVVLGSVIGGLVLVALVVIVLVWRLKTNKQKPVEGSDWLPIPATAGGSSHSRTSRLTDGTIQGSPLRNINLGLKVPLQDLQLATKNFDEKQIIGKGGFGIVYKGVLKNGMKVAVKRSEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMDKGTLRDHLYNTKLPSLTWKQRLEICIGAARGLQYLHKGASGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDQHSYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIEPSLPREQVNLAEWGILCKNKGILEDIIDPTIKGQLDQNSFRKFSETIEKCLQEDGSDRPTMGDVLWDLEYALQLQRGAIHREPHEDSSSSASGSLQLPNVRRLPSLSTLSEVDDMSIAMGDRSDTADDSVFSQLKIDEAR* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0838 846 Pfam Malectin-like domain 42 396 IPR024788 -
Amo11g0838 846 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 29 832 - -
Amo11g0838 846 Gene3D Phosphorylase Kinase; domain 1 468 579 - -
Amo11g0838 846 ProSiteProfiles Protein kinase domain profile. 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0838 846 PANTHER OS07G0166700 PROTEIN 29 832 IPR045272 GO:0004714|GO:0006468
Amo11g0838 846 SMART serkin_6 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0838 846 SUPERFAMILY Protein kinase-like (PK-like) 490 775 IPR011009 -
Amo11g0838 846 CDD STKc_IRAK 510 775 - -
Amo11g0838 846 Gene3D Transferase(Phosphotransferase) domain 1 580 796 - -
Amo11g0838 846 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Amo11g0838 846 Pfam Protein tyrosine and serine/threonine kinase 507 771 IPR001245 GO:0004672|GO:0006468
Amo11g0838 846 Gene3D - 219 397 - -
Amo11g0838 846 Gene3D - 34 185 - -
Amo11g0838 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Amo11g0838 846 MobiDBLite consensus disorder prediction 824 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0838 Amo-Chr11 19163671 19166211 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0838 13 846 Receptor kinase-like Gene Family AT2G23200 45.287 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo11g0838 PK_Tyr_Ser-Thr 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0838 - - adu:107480521 1503.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0838 11 19163671 19166211 Amo11g0838 11 19163671 19166211 ECH