Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0835 ATGAAGCAAGGAGTGTTGACCCCTGGTCGTGTTCGTCTTTTGCTTCACAGAGGAACTCCTTGCTTCCATGGATATGGAAGGCGCAATGGAGAGCGTAGGAGAAAGTCTGTTCGCGGGTGCATTGTTAGCCCTGATCTCTCAGTTTTGAACTTGGTGATTGTGTTAGAAGCTTTCTCATGTCACATTTGA 189 0.4709 MKQGVLTPGRVRLLLHRGTPCFHGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVLEAFSCHI* 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0835 62 SMART Ribosomal_S6e_2 1 57 IPR001377 GO:0003735|GO:0005840|GO:0006412
Amo11g0835 62 PANTHER 40S RIBOSOMAL PROTEIN S6 1 55 IPR001377 GO:0003735|GO:0005840|GO:0006412
Amo11g0835 62 Pfam Ribosomal protein S6e 1 54 IPR001377 GO:0003735|GO:0005840|GO:0006412
Amo11g0835 62 PANTHER 40S RIBOSOMAL PROTEIN S6 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0835 Amo-Chr11 18984299 18984667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0835 1 54 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 94.444 5.28e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0835 K02991 - aip:110265524 130.954