Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0825 AAAAACGTCCTTGCATTCCTTCTCCTCGTTACCGTTAACCAATGTTATGCCCTCACTAGAGACGGCGTCCTCTTACTCTCTTTCAAGTACGCCGTTCTAAACGACCCTCTCTCCGTTCTTGCCACCTGGAACTACAGCGACGCCACTCCATGTTCTTGGAACGGCGTTACGTGCTCCACCGTTTCCGGTAACGGTTTCCAGAACAGAGTAACGGCTTTGTCACTTCCCAATTCTCAGCTTGTGGGTTCAATCTCTTCCGATCTAGGCTCCATAGAGCACCTTCAAATTCTTGACCTCTCCAACAACTCACTCAATGGCTCCATCCCCGCTTCGCTATTCCAAGCCTCCGAGCTTCGGTCGCTGAACCTCTCTAATAACCTCATTAACGGTGTGCTTCCAGGTTCGGTGGTGCAGCTTCGGAATCTCCGGTTTCTCAACCTATCAGACAATTACTTGGCGGGAAAAATCCCTGATAATTTGTCAAACATGCAGAACCTAACCGTGTGTTCTTTGAAAAGCAATTACTTCACTGGCTTTCTCCCCAGCGGGTTAAGTTCCGTGCAGTTTCTGGATATTTCGAGTAACCTGCTGAACGGGACTCTGCCACRAGGATTTGGTGGTGACCAAGTTCATTACTTGAACATCTCATACAACAGGTTTACRGGAAGTATACCGGTTCAGTTTGCGGAGAAAATCCCGCGAAACGCAACTGTTGACTTGTCGTTTAACAATCTCACRGGCGAGATTCCGGACTCACCTGTTCTTTTGAGTCAGAAAACGACGTCGTTTTCAGGGAACCCTGATCTGTGTGGGGAACCTACGAAAAATCCGTGTCCAATTCCTTCTTCACCGTCGTCGGAGCCGAGAGCTTCCTCTCCTACTTCTCCGCCGGCGATAGCTGCGATTCCGAAGACGTTCGGTGATTCTCATCCGCTGGCGCCAGCCGGCGACGGTTCAAGTTCAAGTAACGAGAAACAGAGCGGTGGTCTAAGGAGAGGAACGATTATAGGAATCGCGGTGGGTGACGTCGTCGGCATTGGCATCTTAGCTATGATTTTCATCTACGTTTATCGGTTGAAGAYGAAGAGAGAAGTGGAGAGTGCGATCAAGGACGAAGCTTCTTTTGCGAGGAGCGAAACGTCGTCGTCWTCGGAGTCGAGAGGGTTCACAAGGTGGTCCTGCTTACGGAAGAGAGTAGAGGAGGAAAAAGAATCAGATAGCACGTGCTCTTCAGACAGCGACGTGGAAGCAGCACGTGACGGATACAACTACAACCAACACCAGAATGGTCGTCAGGAGAATTCGAAGCAGCACGAAGGGTCAGGGCAGCAGAACAAGACGGGGACTTTGGTGACTGTTGATGGCGATAAGGAGCTTGAAGTTGAGACGCTTCTCAAGGCTTCAGCGTACATATTGGGCGCCACTGGTTCAAGCATAATGTACAAGGCGGTGCTTCAAGATGGAACTTCCTTGGCGGTTCGTAGAATCGGTGAGAATGGCGTTGAGAGGTTCAAGGACTTTGAGAACCAGGTTCGGGTCATAGCTAAATTGGTTCACCCAAATTTGGTTCGTATTCGTGGGTTCTATTGGGGACACGAGGAGAAGCTCATCATTTATGACTTCGTTCCAAATGGTAGCCTCGCTAATGTTCGTTACAGGAAAGTGGGCTCCTCTCCAAGCCATTTACCATGGGAACTTCGTCTCAAGATAGCGAAAGGGGTAGCACGTGGGCTAGCTTACCTCCACGAGAAGAAGCACGTGCATGCGAATCTGAAGCCCAGCAATATTCTATTGGGCAGCGACATGGAGCCCAAGATTGGAGACTTTGGGCTCGAAAGGATTGTGACGGGTGATACTAGCTACAAAGCTGGAGGATCGGCACGTATTTTTGGGAGCAAGAGATCCACGGCATCACGTGACAGCTTTCAAGACATAACACTTGGGCCTAGCCCAAGTCCAAGCCCAAGTTCGATTAGTGGTGTATCTCCTTACCATGCTCCTGAGTCGCTCAGGAACCTTAAGCCTAATCCAAAGTGGGACGTGTACTCTTTTGGGGTCATGTTTCTTGAACTCTTATCAGGGAAGATTGTTGTCTTGGATGATATGGGCCAAGGGACTGGGCTTTTAGCTGAGGACAAGAATCGGGCTTTGCGGATGGCTGATGCGGCTATAAGACCTGAGATGGAGGGTAAGGAAGAGGCTTTGTTGGCTAGCTTCAAGTTGGGTTACAGTTGCGTGTCTAGTGTTCCGCAAAAAAGGCCACCAATGAAAGAGGTGTTACAAGTTCTTGAAAAGATACCATCGTCATCAACTTCTTCTTCCTCATTTTTTTACAGCCACTAA 2343 0.4917 KNVLAFLLLVTVNQCYALTRDGVLLLSFKYAVLNDPLSVLATWNYSDATPCSWNGVTCSTVSGNGFQNRVTALSLPNSQLVGSISSDLGSIEHLQILDLSNNSLNGSIPASLFQASELRSLNLSNNLINGVLPGSVVQLRNLRFLNLSDNYLAGKIPDNLSNMQNLTVCSLKSNYFTGFLPSGLSSVQFLDISSNLLNGTLPXGFGGDQVHYLNISYNRFTGSIPVQFAEKIPRNATVDLSFNNLTGEIPDSPVLLSQKTTSFSGNPDLCGEPTKNPCPIPSSPSSEPRASSPTSPPAIAAIPKTFGDSHPLAPAGDGSSSSNEKQSGGLRRGTIIGIAVGDVVGIGILAMIFIYVYRLKXKREVESAIKDEASFARSETSSSSESRGFTRWSCLRKRVEEEKESDSTCSSDSDVEAARDGYNYNQHQNGRQENSKQHEGSGQQNKTGTLVTVDGDKELEVETLLKASAYILGATGSSIMYKAVLQDGTSLAVRRIGENGVERFKDFENQVRVIAKLVHPNLVRIRGFYWGHEEKLIIYDFVPNGSLANVRYRKVGSSPSHLPWELRLKIAKGVARGLAYLHEKKHVHANLKPSNILLGSDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITLGPSPSPSPSSISGVSPYHAPESLRNLKPNPKWDVYSFGVMFLELLSGKIVVLDDMGQGTGLLAEDKNRALRMADAAIRPEMEGKEEALLASFKLGYSCVSSVPQKRPPMKEVLQVLEKIPSSSTSSSSFFYSH* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0825 780 ProSiteProfiles Protein kinase domain profile. 466 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0825 780 CDD STKc_IRAK 472 766 - -
Amo11g0825 780 PANTHER BNAC07G16060D PROTEIN 9 769 - -
Amo11g0825 780 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Amo11g0825 780 Gene3D Ribonuclease Inhibitor 185 280 IPR032675 -
Amo11g0825 780 MobiDBLite consensus disorder prediction 641 669 - -
Amo11g0825 780 MobiDBLite consensus disorder prediction 256 329 - -
Amo11g0825 780 MobiDBLite consensus disorder prediction 641 663 - -
Amo11g0825 780 PRINTS Leucine-rich repeat signature 139 152 - -
Amo11g0825 780 PRINTS Leucine-rich repeat signature 94 107 - -
Amo11g0825 780 MobiDBLite consensus disorder prediction 405 450 - -
Amo11g0825 780 MobiDBLite consensus disorder prediction 422 450 - -
Amo11g0825 780 Gene3D Phosphorylase Kinase; domain 1 428 541 - -
Amo11g0825 780 MobiDBLite consensus disorder prediction 315 329 - -
Amo11g0825 780 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 769 - -
Amo11g0825 780 Pfam Protein kinase domain 472 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0825 780 SMART LRR_typ_2 139 163 IPR003591 -
Amo11g0825 780 SMART LRR_typ_2 91 115 IPR003591 -
Amo11g0825 780 SMART LRR_typ_2 184 207 IPR003591 -
Amo11g0825 780 SMART LRR_typ_2 116 138 IPR003591 -
Amo11g0825 780 Gene3D Ribonuclease Inhibitor 17 184 IPR032675 -
Amo11g0825 780 SUPERFAMILY Protein kinase-like (PK-like) 471 767 IPR011009 -
Amo11g0825 780 SUPERFAMILY L domain-like 20 273 - -
Amo11g0825 780 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Amo11g0825 780 Gene3D Transferase(Phosphotransferase) domain 1 542 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0825 Amo-Chr11 18511206 18514257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0825 4 780 Receptor kinase-like Gene Family AT4G37250 58.543 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo11g0825 Pkinase 2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0825 - - ahf:112799685 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0825 11 18511206 18514257 Amo11g0825 11 18511206 18514257 ECH
Amo01g1199 01 17852201 17855364 Amo11g0825 11 18511206 18514257 hybridization