Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0811 ATGATTTTTAAGACACTAGAAGAAGCTCGAAAGTTCTACAAACATTATTCCAAACTTGCCGGTTTTTCTACCAAAATAAGGAACACGACTCGGGATGGAGACAAGATTAAGAATCAACTAATTGTATGCTCCAGAGAGGGGAGGTGGAAATCAAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCGGCCAGAATTTATGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTCCAAAGTTGTTTTGAATCATTCACATCCTTATTGTCCAGATCAGGCTGAGATGCTCAAACAACAAAGGGAGCTTAGCATCTTGCACTGTTTTCGGTTCACCAGACCTTATGGCTTCGGTTTGGTTTTAGAGCTGTACGAGGATCGCCATATATGGATTCCGGTTTACTTGGATCACCACTTTTGGGTCGAGATGAGAAACACACAAAGGAGCGAGAGCATGCATTCATTTTTCAACAAATTCATCACACGGAATAGCTCTTTGAGACAATTCAGAGAATTTGATGCTACAGATTTTCACACCGTGATACCGTGTACAACAAAATCAGTAATAGAGGAACAATTTCAGCATGTATATACCCATGAGAAGTTTAGGGAAGTTCAAGCTCAATACAGAAGTAAACTAAACTGTATCATAAGATCAATGCATTCCACCATAGGTTTCACAACATATGAAGTAATAGAGCAGGTTTCCAACTCTACATTCAATAAGTTTGTCGTCACCTACGATGCAGTATCACGAGATGTAAAGTGTCATTGCTTGCTGCTTGAGTCTAGGAGCATATTGTGCTGCCATTCCCTAAGCGTCCCAAGCTTTGAGCGAGTGGATAACGTGGCACCGAAATACATATTGGAATGCTGGAGCAAGAACATAAAGAGGAGGCATACACACATCAAGAGCAGCCAAGATGAACCTCTACAGGAGACAAGAAATAAGAGATTTGATGAATTGGTGTTTCAGTCACACAATATATGTGAATTTGCATTCGAGTCTAAAGAGTTAACCGGAATTTTGCACCGAGCATTTGAC 1062 0.4021 MIFKTLEEARKFYKHYSKLAGFSTKIRNTTRDGDKIKNQLIVCSREGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVGLWTISKVVLNHSHPYCPDQAEMLKQQRELSILHCFRFTRPYGFGLVLELYEDRHIWIPVYLDHHFWVEMRNTQRSESMHSFFNKFITRNSSLRQFREFDATDFHTVIPCTTKSVIEEQFQHVYTHEKFREVQAQYRSKLNCIIRSMHSTIGFTTYEVIEQVSNSTFNKFVVTYDAVSRDVKCHCLLLESRSILCCHSLSVPSFERVDNVAPKYILECWSKNIKRRHTHIKSSQDEPLQETRNKRFDELVFQSHNICEFAFESKELTGILHRAFD 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0811 354 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 127 330 IPR031052 GO:0006355
Amo11g0811 354 Pfam FAR1 DNA-binding domain 11 95 IPR004330 -
Amo11g0811 354 PANTHER OS03G0843700 PROTEIN 127 330 - -
Amo11g0811 354 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 106 IPR031052 GO:0006355
Amo11g0811 354 PANTHER OS03G0843700 PROTEIN 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0811 Amo-Chr11 18111570 18113554 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g0811 FAR1 1.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0811 - - adu:107484182 378.252