Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0800 ATGGAGACATCGGAGAATTGTTCTGTGAAAGTTGCTCTTCACATTCGTCCGCTCATTGCTGATGAACGACAGCAAGGTTGCAGAGAATGCGTTTCAGTTACGCCTGCGAAGCCTCAGGTCCAAATTGGGTCACATTTCTTTACATTTGATCATGTTTACGGAAATGGTGGGTCTCCTTTGGCTGATATGTTCGAAGAATGCATTGCCCCGTTAGTTGATGGCTTATTCCAAGGATATAATGCTACTGTACTTGCGTATGGCCAGACAGGATCTGGGAAAACATATACAATGGGAACTGGCTATAGTGACAATTGTCAGACACAGGCTGGATTAATTCCTAAGGTTATGAATGCCTTGTTCAGCAAGATTGAAACACTAAAGCATCAGACAGAATTTCAGTTGCATGTGTCCTACATTGAGATTTTGAAGGAAGAGGTGAGGGACTTGTTAGATTCTATATCTAACAGTAAATTGGAATCTGCTAATGGCAATTCTGGAAAAGCAACTGTTCCTGGGAGAACACCGATACAAATTCGTGAAACCTCAAGTGGAGTCATAACACTGGCAGGATCAACTGAAGTTGCTGTGAGTACACTACAGGAGATGTCTACTTGCTTGGAGCAGGGTTCTTTAAGTAGGGCAACAGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATCTTCACAATCACACTAGAACAGATGCGCAAGCTCCATTCAATTTCTCCCGACAATGACTCTTCAGACGAGGATATGGGTGAAGAATACCTTTCTGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAGCGAGCTAAAAGAACTGGTTCTGATGGTGTTCGTTTAAAAGAAGGCATACACATCAATAAAGGTCTCCTTGCACTTGGAAATGTCATAAGCGCATTGGGAGATGAGAAAAAGCGAAAGGAGGGTATGCATGTCCCGTATCGGGATAGCAAACTCACTCGACTTTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGTCCTGCCGACATCAATGCTGAGGAAAGTCTCAATACTCTCAAATATGCAAATCGTGCTCGCAATATTCAAAATAAGCCTATTGCTAATCGAGATTTGATATCCAATGAGATGCAGCAAATGCGTCAACAGTTAAAGTACTTGCAGGCTGAACTTTGTGCTCGGGGAGGAACTCCAGCTGATGAAGTGCGGGTTCTCAAGGAAAGGATTGTGTGGCTTGAGGCGACTAATGAGGGCCTCTCTCATGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGACAAATGTGAAATTGATGAACCAGATGGTCATATTTATCTTGAAAGACACTTTCAGAGCTCTGTTTCATCTGATCATCCCATGATTGAAAGTATATCTGGTGACGATTCAGGTGAAAGTGATGAAGCAGTAAAGGAATTGGAGCATGCACTTTTGCAGAATACCATGGATAAAGAGATGAATGAGTTAAATAAGCGCTTAGAGCAGAAAGAGTCTGAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAAAAAATTATGGAGCTTGAAGAGGAAAAAAGAAAAGTGCAGGTTTGGACATAG 1635 0.4232 METSENCSVKVALHIRPLIADERQQGCRECVSVTPAKPQVQIGSHFFTFDHVYGNGGSPLADMFEECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYSDNCQTQAGLIPKVMNALFSKIETLKHQTEFQLHVSYIEILKEEVRDLLDSISNSKLESANGNSGKATVPGRTPIQIRETSSGVITLAGSTEVAVSTLQEMSTCLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSISPDNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGVRLKEGIHINKGLLALGNVISALGDEKKRKEGMHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPIANRDLISNEMQQMRQQLKYLQAELCARGGTPADEVRVLKERIVWLEATNEGLSHELHEYRSRCAFVDKCEIDEPDGHIYLERHFQSSVSSDHPMIESISGDDSGESDEAVKELEHALLQNTMDKEMNELNKRLEQKESEMKRIGIDTEALKEHFGKKIMELEEEKRKVQVWT* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0800 544 Coils Coil 375 395 - -
Amo11g0800 544 Coils Coil 491 518 - -
Amo11g0800 544 CDD KISc_KIF4 7 368 - -
Amo11g0800 544 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo11g0800 544 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo11g0800 544 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo11g0800 544 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo11g0800 544 Pfam Kinesin motor domain 15 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo11g0800 544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
Amo11g0800 544 PANTHER KINESIN-LIKE PROTEIN KIN-4B 1 541 - -
Amo11g0800 544 Coils Coil 139 159 - -
Amo11g0800 544 Gene3D Kinesin motor domain 1 395 IPR036961 -
Amo11g0800 544 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 541 - -
Amo11g0800 544 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo11g0800 544 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo11g0800 544 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0800 Amo-Chr11 17541897 17549145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0800 9 413 Calmodulin-binding Proteins AT5G65930 34.230 2.57e-56 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0800 - - gmx:100790341 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0800 11 17541897 17549145 Amo11g0800 11 17541897 17549145 ECH