Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0780 ATGGAATCCATCCGAGTCATTTCCACAGGCTTAGTCCAAGCACCAAACCAAAGCAATGAATCAACTGAACAGAAGATCCATTTAACCCCATGGGATCTGACTTTCCTCCCACTTGAAACCATCCAGAAAGGCCTTCTATTTCAGAAACCCACTAAAACAGAACACCACCATACACCATTCCAAATCAACAACCTCAAACATTCATTCTCCACCACCCTCGCCTTCTTTCCACCCCTCACTGGCCGTTTTGTCATTACACACCACAACGAAGACAAAGATGCCACGTGTCACATCCTCTGCAACAACCAAGGAGCACTCTTCGTCCACGCAGTAGCAGAGAACACAACCGTCAACGACATTCTTCAAGCCAAGTACGTTCCCTCCATTGTTCACTCCTTCTTCCCGCTTTACGGCGTTCACAACCACCAAGGCACGTCCCAGCCACTCTTTGCCGCTCAAGTCACGGAGTTAGTTGACGGCGTCTTCATTGGTTGCACTCTCAATCATACCCTCGGAGACGGCAGGTCGTTTTGGCATTTTGTCAATTCTTGGGCGGAAATCTCGCGCAGCGGCTTCAACAACAAACCATCGAAACTCCCTTCACTCGAACGCGCGTTTCTGGTAAACGACGTTGAGCTTCCAATACGGTTCCCTTTCACAGAAAAAGACTTCGAAATCATACCCAATCCAGAACCGCCGCTACCAGAGAAGTTCTTCCACTTCACAAAGGAGAAATTAGCAAGGCTGAAAGCGAAAGCTAACGCAGAAGCTGGCACAGAGAAAATCAAAATCTCTTCACTGCAATCGCTTTTAACACATCTTTGGATCTCTGTTTACCGTTGCAAGCGCGTGGATCCTCAAGATGAACTCTCCTACTTCATTCAAGTTGGAGTTAGGCCACGGTTGGTTCCACAGTTGCCGGAGAGTTACTTCGGAAATGCGGCGATTTTCGACAGCGTGAGGATGAGAGCAAGGGAGCTTCTAGAAGGTGGAATTGGAAAGTGTGCTCTTGAGATGAACAAGATGATAGCTTCGTACACTGATGAGAAGGTGAAGAGTCACTTTGAATCTTGGTTGAGAAACCCAACTTTGTTTACTTTGGGGAAAGTGGCTAATAGTAATTCTTTGTCGACTAGTAGCTCCCAGCGCTTCGATGTTTACGGTAATGATTTTGGGTGGGGAAAGCCTGTGGCGGTTCGGAGTGGCGTCGCAAACAAGCGTGCCGGAAAGATTTCCGTGTTTGCTGGGAATGAAGAAGGTAGTATTGACCTTGAAGTGTGTCTTCCATATGACATCTTGGAGGCTTTGTGGAATGACACTCAGTTCACTATGGATTCCGTTTCATTTCAAGGGGAAGGGTCACATGCAGAGTTATTGGTTGAGAATTGTTAG 1392 0.472 MESIRVISTGLVQAPNQSNESTEQKIHLTPWDLTFLPLETIQKGLLFQKPTKTEHHHTPFQINNLKHSFSTTLAFFPPLTGRFVITHHNEDKDATCHILCNNQGALFVHAVAENTTVNDILQAKYVPSIVHSFFPLYGVHNHQGTSQPLFAAQVTELVDGVFIGCTLNHTLGDGRSFWHFVNSWAEISRSGFNNKPSKLPSLERAFLVNDVELPIRFPFTEKDFEIIPNPEPPLPEKFFHFTKEKLARLKAKANAEAGTEKIKISSLQSLLTHLWISVYRCKRVDPQDELSYFIQVGVRPRLVPQLPESYFGNAAIFDSVRMRARELLEGGIGKCALEMNKMIASYTDEKVKSHFESWLRNPTLFTLGKVANSNSLSTSSSQRFDVYGNDFGWGKPVAVRSGVANKRAGKISVFAGNEEGSIDLEVCLPYDILEALWNDTQFTMDSVSFQGEGSHAELLVENC* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0780 463 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 2 443 - -
Amo11g0780 463 Gene3D - 220 438 IPR023213 -
Amo11g0780 463 Gene3D - 1 215 IPR023213 -
Amo11g0780 463 Pfam Transferase family 18 439 - -
Amo11g0780 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0780 Amo-Chr11 16546878 16548328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0780 45 428 Monolignol Biosynthesis Gene Families AT5G48930 27.094 8.80e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0780 - - adu:107480292 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0780 11 16546878 16548328 Amo11g0780 11 16546878 16548328 ECH
Amo01g1154 01 16217246 16218826 Amo11g0780 11 16546878 16548328 hybridization