Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0776 ATGGCTGAACAGAAAAACCAAGAAATTGGCCACAAGGAACTCGCTCATAAGACTCTCCTTCAGAGCGATGCACTCTACCATGTGTTTCCAAGAGAGCATGAATGCATGAAGGAGCTCCGTCAGATGACAGAAAAACACCCTTGGGGTCTCATGGCTACCCCACCAGACGAAGGACAACTTATAAACATGCTGGTTAAACTCATAAACGCAAAGAAGACGATGGAAATTGGTGTCTACACTGGTTATTCTTTACTCTCTACTGCTCTTGCTCTTCCTCATGATGGAAAGATCTTTGCCATAGACATCAACCGGGAATATTATGAACTTGGACTGCCCATGATTGAAAAAGCTGGAGTGGCTCACAAAATTGATTTCAAAGAAGGATACGCTCTTCCTCTTCTTGACGAATTGTTATTAGATGAAAATAACAAGGGGGCATTTGATTTTGTCTTCGTGGATGCGGATAAGGACAACTACTTGAACTACCATAAGAGGGTGATTGAGCTGGTGAGAGTTGGGGGATTGATTGGCTACGATAACACTCTATGGAGTGGTGCTGTGGCGGGCCCACCTGATGCACCAATGCTGGATTATGTGAAGCAATTCCGTAGTTATGTCATAGAGGTCAACAAGTACCTCGCGCATGATTCAAGGATCGAGATTTGTCAAATCCCTGTTGGTGATGGCATTACCCTGTGCCGCCGCATCATATGA 714 0.4468 MAEQKNQEIGHKELAHKTLLQSDALYHVFPREHECMKELRQMTEKHPWGLMATPPDEGQLINMLVKLINAKKTMEIGVYTGYSLLSTALALPHDGKIFAIDINREYYELGLPMIEKAGVAHKIDFKEGYALPLLDELLLDENNKGAFDFVFVDADKDNYLNYHKRVIELVRVGGLIGYDNTLWSGAVAGPPDAPMLDYVKQFRSYVIEVNKYLAHDSRIEICQIPVGDGITLCRRII* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0776 237 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 12 236 IPR002935 GO:0008171
Amo11g0776 237 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 2 237 - -
Amo11g0776 237 CDD AdoMet_MTases 75 176 - -
Amo11g0776 237 Pfam O-methyltransferase 32 236 IPR002935 GO:0008171
Amo11g0776 237 Gene3D Vaccinia Virus protein VP39 18 237 IPR029063 -
Amo11g0776 237 PANTHER O-METHYLTRANSFERASE-RELATED 2 237 - -
Amo11g0776 237 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 235 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0776 Amo-Chr11 16392510 16395875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0776 3 236 Monolignol Biosynthesis Gene Families AT4G34050 67.500 5.19e-126 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0776 K00588 - gmx:100795858 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0776 11 16392510 16395875 Amo11g0776 11 16392510 16395875 ECH
Amo01g1124 01 15502801 15507881 Amo11g0776 11 16392510 16395875 hybridization