Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0768 ATGGATTGGGTAAGAGGAGACCCTGTTGGTCGAGGAAGCTTCGCCACGGTTAGTTTAGCGTTTTCAAAAAACGGTTCTGCTGATAAATCTTTGGTTTCTCCCACCGCCGTGAAGTCCTGCGAGGTTGGAGCCTCCTACTGGCTCAAGAACGAGAAACACGTGCTCGACCGTCTCGGCAACACGTGCCCACGAATCATCACGTGCTTTGGCGATGATTACACCTTGGAGAATGGCCGCCAATACTACAACCTCTTCCTGGAGTACGCCTCCCGAGGCAGCCTCTCGGATGAGCTTAACCGCCGCGGAGGGTGTATCCCAGAGCTCGAAGTTCGACATCACGTGAAGTCTATCGTGGAAGGCCTCATCCATATTCACAACACTGGATTCGCCCACTGCGACATAAAGCTTCAAAACATACTCATGTTCGAAAACGGTCAGGTTAAGATTGCGGATTTTGGTCTAGCGAAAGAAACAGGGGAGAAACAGGGGAATGAGAAGAAAAATAAGTGTTTCGAATGCAGGGGAACTCCTATGTTTATGCCGCCGGAATTGGTTAACAACGGCGAGTGCGAGTCTCCGGCGGATATTTGGGCCTTGGGGTGTACTGTAATAGAGATGGTAACTGGTAAGCCGGCATGGAACATTGCAAAAGATTCGAATATTTGGTCCTTGATGCTTCGAATCGGAACAGGGGAAGAAGTACCTTGTATTCCAAATGAAATTTCAAAAGAAGGGAAGGATTTCTTGGACAAGTGTTTTGTTAAAAATCCTAAGAAGAGATGGACGGCTGAAATGCTTTTGGATCATCCGTTTCTCGCTTCTCATACTGTTTCATTGAAAGCTGACTTCATGGCTAATAATTATTCGCCGCGAAGCCACTTTGATTTCCCAGACTGGGTTTGTTCTGTTCCAAGCTCTCACGAGCCACAGTCAAATTTTAATTTTGATTCGTTTTCGGCCGTGAATCGAATTCAGAGGCTTGCAACAAAGGATCGAGTGCGGGAGAATTGGCCGGAATCTGATGGTTGGACTTGGACCAGTATCAGGGGAAATTAA 1056 0.4735 MDWVRGDPVGRGSFATVSLAFSKNGSADKSLVSPTAVKSCEVGASYWLKNEKHVLDRLGNTCPRIITCFGDDYTLENGRQYYNLFLEYASRGSLSDELNRRGGCIPELEVRHHVKSIVEGLIHIHNTGFAHCDIKLQNILMFENGQVKIADFGLAKETGEKQGNEKKNKCFECRGTPMFMPPELVNNGECESPADIWALGCTVIEMVTGKPAWNIAKDSNIWSLMLRIGTGEEVPCIPNEISKEGKDFLDKCFVKNPKKRWTAEMLLDHPFLASHTVSLKADFMANNYSPRSHFDFPDWVCSVPSSHEPQSNFNFDSFSAVNRIQRLATKDRVRENWPESDGWTWTSIRGN* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0768 351 ProSiteProfiles Protein kinase domain profile. 3 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0768 351 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 311 - -
Amo11g0768 351 Gene3D Transferase(Phosphotransferase) domain 1 2 329 - -
Amo11g0768 351 SUPERFAMILY Protein kinase-like (PK-like) 3 309 IPR011009 -
Amo11g0768 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Amo11g0768 351 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 311 - -
Amo11g0768 351 CDD STKc_MAPKKK 2 272 - -
Amo11g0768 351 ProSitePatterns Protein kinases ATP-binding region signature. 9 38 IPR017441 GO:0005524
Amo11g0768 351 SMART serkin_6 3 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0768 351 Pfam Protein kinase domain 6 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0768 Amo-Chr11 15948863 15950353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0768 1 299 MAP Kinase Kinase Kinase AT4G36950 56.291 1.10e-111 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo11g0768 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0768 - - aprc:113858661 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0768 11 15948863 15950353 Amo11g0768 11 15948863 15950353 ECH
Amo01g1114 01 15240230 15241660 Amo11g0768 11 15948863 15950353 hybridization
Amo05g0797 05 9754004 9755459 Amo11g0768 11 15948863 15950353 PCT
Amo11g0768 11 15948863 15950353 Amo05g0797 05 9754004 9755459 PCT