Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0723 ATGATTTTCAAGACACTAAAAGAAGCTGGAAAGTTCTACAAATATTATTCTAAACTTGCCGGTTTTTCTTCAAAAATAAGGAACACGACTCGAGACGGAGACAAAATTAAGAATCAACTAATTGTATGCACCAGAGAGGGGAGGTGGAAATCCAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCGGCCAGAATTTACGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTTCAAAGTTGTTTTGAATCACTCACATCTTTGTTGTCCAGACCAGGTTGAGATGCTCAAACAACACAGGGAGCTTAGCATGTTTGTGCCATGCACTGTTTTCGGTTCACCACACCTTATGGGTTCGGTTTGGTTTGCAGAGCTGTACGAGGATCGACATTTATGGATTCCAGTTTACTTGGATCACCACTTTTGGGCCAGAATGAGAAACACACAAAAGAGTGAGAGCATGCATTCATTTTTCAACAAGTTCATCACATGGAATTGCTCCTTGAGATAA 531 0.4011 MIFKTLKEAGKFYKYYSKLAGFSSKIRNTTRDGDKIKNQLIVCTREGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVGLWTIFKVVLNHSHLCCPDQVEMLKQHRELSMFVPCTVFGSPHLMGSVWFAELYEDRHLWIPVYLDHHFWARMRNTQKSESMHSFFNKFITWNCSLR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0723 176 PANTHER OS03G0843700 PROTEIN 127 175 - -
Amo11g0723 176 PANTHER OS03G0843700 PROTEIN 1 104 - -
Amo11g0723 176 Pfam FAR1 DNA-binding domain 11 95 IPR004330 -
Amo11g0723 176 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 127 175 IPR031052 GO:0006355
Amo11g0723 176 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 104 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0723 Amo-Chr11 14664013 14665428 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g0723 FAR1 1.4e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0723 - - aip:107646405 218.394