Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0701 ATGGGAGGAGCCACCGCGCAACAGCAGGAGTTAGAGAACATAATCGAAAAAGTCAAAACTGCCCAAAGATGCAAACAAACCAGGCGGATCCTAAAGTCAACCCTAAAGGGTTCAAAGTCTCTTGTGTACGAAATCAAGCAATATAACAACGACCTTGATCAACCAAGAGATGAAATTAAAGCTCTGATCAAAGAAAATGGTGCAGCTCAAGATTCAGAATCGCCATGCTGCAATTGCTTCTCGTCTTGTTCCCTTTGGTTTGGTAAGTGCTTCTTTCATATCCCTTTCTACAGGATAAGATCGGTGCGGAGCGAGAGGAACAGTTATTGTGATGCGAAGGAGATGCTTTCGAATGTTAGGGACGTTCTTGAACTTCTTAGTAGACAGAATATCGAGAAGAGGCTTAGCGGCGGTTCGATTAAGCGTCGTCCTTGTGGTTTTCCTGAGAAACCGGGTTTTACTGTTGGATTGGATGAGCCTTTGAGGAGGCTGAAGGTGGAGGTTCTGATGGAGGGCGTTTCGGTAATTGTATTGACTGGACTTGGTGGTTCTGGAAAGACTACTCTGGCTACAATGCTCTGTTTTGATGAACAAGTCAAAGATAAATTCGATGAAAATATATTGTTTGTCACCTTCTCCAAAAATCCCAAGTTGAAGACCATTGTAGAGAGACTATTTGAACAATGTGGATATCAAGTGCCTGAGTTTAAAAGCGACAATGATGCTGTTAACCAAATGGTAGTTTTATTGAGGCATATTGGGACAAGACCGACGTTGTTGGTCCTCGACGATGTTTGGCCTGGCTCAGAAGCCCTTGTTGAAAAATTTCAAATTCAAATGTCACAGTACAAGATTCTAGTGACTTCAAGGGTTGCATTTCCTAGATTCGCCTCTCACTTTATCCTAAAACCACTTAATCAAGAAGATGCATTGACGCTTTTCCGTCACTATGCTTTATTGGAAAGAAGCTGCTCAGATATACCAAATGAAGATATTGTCCAAAAGGTTGTAAGTGGTTGCAAGGGTTCACCTCTTGCTATTATGGTGATGGCTAGATCCCTCAGTCGTCAACCTTACGGGTTTTGGCTCAAGATAGTAGAGAAATTGTCACAAGGTCATTCTATACTTGATTCTAATGCTGAATTGGTAAACTGTCTACAAAAGATCTTAGAAGTATTGCAGAATAAGCCCTTCATAAAGGAGTGTTTCATGGACTTAGGGTTATTCCCCGAAGATCAAAGAATCCCTGTCACTGCTCTCATTGATATATGGAAAGAATTGTATGGACTGGACGATGATGGCCAAGAAGCAATGACCATCATCAATATATTGGACTCCATGAATTTGGTTAAGCTCTCAGTAGCAAGGAAAAGTGTTTGTGGTGTAGACAATTACTATTACAATAACCACTTCCTCGTCCTACATGATCTTGTAAGAGAACTTGCAATTTATCAAAGCAATCAAGAACCAATTGAACGTAGACAGAGACTGATGATTGATGTGAATGAAAATGCTAGCCAACGGTGGCTCGGTAAGAAGCAGAAAGGCATGATGATGGCCCGCATTTCAAGTTATCTGACACGATGTGTTAAACAAAAGGCAGTACAAGTCACCGTCCGCACATTGTCAATATCAACTGATGAAGCTTACCCTTCTCTCTTGTCCAATGTGAAAACAGATGAAACTGAGGTTTTGATTGTTGATCTCCGAACAAAACAGTACTCGTTCCCAGAATCGATTGAAAAAATGAACAAACTAAAAGTTATCATTGTTACAAACTATGGTTTCCATCCATCTGAACTGAACAATTTTGAGAAACTCAGTTCCTTATCAAACCTGAGAAGAATCAGATTAGAGAGAATTTCTGCTCCTCCGCTTGTCATATTGAAGAATCTAAGAAAAATATCCCTCTACATGTGTAATATGACTCAGGTTTTCCAAAATGGCAACATCCCAATATCGGAAGCATTTCCAAATCTAATCGAATTGAGCATTGACTACTGCAAAGATATGGTTAAATTGCCTAATGAGTTGTGTGATATTACCCCACTAAAGAATATCAGTATTACAAATTGTCACAAGTTTAATGCACTTCCCCAAGACATTGGAAAGTTATCAAAGCTGGAACTTCTAAGGCTTAGTTGTTGTACTGATTTGCAAGGGTTACCGAATTCAATTGGAAGGCTGTCGATTCTGCGTCTTCTTGACATCTCAAACTGCATGAACCTTCCAGATTTACCAGAGGACATTGGAAATCTGCGTAGTCTGAGAAACCTTTACATGACAGGTTGTTCAAATTGCGAATTGCCGTTTTCGGTCGCCAATCTTGAGAATTTAAAAGTCATATGTGATGAAGAAACTGCTGCTTCATGGGAAGCTTTCATGCCAATGATTCCGAATCTAAAGGTAGAGGTGCCTCAAGTTGATGTCAACTTAAATTGGCTTCACCCACTTAGCTCCTAA 2463 0.4028 MGGATAQQQELENIIEKVKTAQRCKQTRRILKSTLKGSKSLVYEIKQYNNDLDQPRDEIKALIKENGAAQDSESPCCNCFSSCSLWFGKCFFHIPFYRIRSVRSERNSYCDAKEMLSNVRDVLELLSRQNIEKRLSGGSIKRRPCGFPEKPGFTVGLDEPLRRLKVEVLMEGVSVIVLTGLGGSGKTTLATMLCFDEQVKDKFDENILFVTFSKNPKLKTIVERLFEQCGYQVPEFKSDNDAVNQMVVLLRHIGTRPTLLVLDDVWPGSEALVEKFQIQMSQYKILVTSRVAFPRFASHFILKPLNQEDALTLFRHYALLERSCSDIPNEDIVQKVVSGCKGSPLAIMVMARSLSRQPYGFWLKIVEKLSQGHSILDSNAELVNCLQKILEVLQNKPFIKECFMDLGLFPEDQRIPVTALIDIWKELYGLDDDGQEAMTIINILDSMNLVKLSVARKSVCGVDNYYYNNHFLVLHDLVRELAIYQSNQEPIERRQRLMIDVNENASQRWLGKKQKGMMMARISSYLTRCVKQKAVQVTVRTLSISTDEAYPSLLSNVKTDETEVLIVDLRTKQYSFPESIEKMNKLKVIIVTNYGFHPSELNNFEKLSSLSNLRRIRLERISAPPLVILKNLRKISLYMCNMTQVFQNGNIPISEAFPNLIELSIDYCKDMVKLPNELCDITPLKNISITNCHKFNALPQDIGKLSKLELLRLSCCTDLQGLPNSIGRLSILRLLDISNCMNLPDLPEDIGNLRSLRNLYMTGCSNCELPFSVANLENLKVICDEETAASWEAFMPMIPNLKVEVPQVDVNLNWLHPLSS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0701 820 Gene3D - 304 384 IPR042197 -
Amo11g0701 820 PRINTS Disease resistance protein signature 175 190 - -
Amo11g0701 820 PRINTS Disease resistance protein signature 727 743 - -
Amo11g0701 820 PRINTS Disease resistance protein signature 340 354 - -
Amo11g0701 820 PRINTS Disease resistance protein signature 252 266 - -
Amo11g0701 820 Gene3D - 386 483 IPR036388 -
Amo11g0701 820 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 9 806 IPR039203 GO:0050832
Amo11g0701 820 Coils Coil 45 65 - -
Amo11g0701 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 406 IPR027417 -
Amo11g0701 820 SUPERFAMILY L domain-like 573 782 - -
Amo11g0701 820 CDD ABC_ATPase 175 265 - -
Amo11g0701 820 Pfam NB-ARC domain 163 390 IPR002182 GO:0043531
Amo11g0701 820 Gene3D - 142 294 IPR027417 -
Amo11g0701 820 Gene3D Ribonuclease Inhibitor 530 792 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0701 Amo-Chr11 14057323 14062035 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0701 173 773 WRKY Transcription Factor Family AT5G45050 23.339 1.09e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0701 - - gmx:100816134 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0701 11 14057323 14062035 Amo11g0701 11 14057323 14062035 ECH
Amo01g0037 01 968104 972814 Amo11g0701 11 14057323 14062035 hybridization
Amo05g1007 05 13150534 13156266 Amo11g0701 11 14057323 14062035 PCT
Amo11g0701 11 14057323 14062035 Amo05g1007 05 13150534 13156266 PCT