Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0697 ATGGCGCACACAACGCAAATTGCCGTTCTTGCATCGCTACTTCAACAGGCATCGGAGAGCATCCTTGAAATGCTTCAAACGGCAAGAAAGAGCAATCGGAACAGAGGAGTTCTAAGGTCGGTAATCCTCACAGAGTTGACTCCTCTGTTCAACGAGATCAAGCAATACAATTACGACGACGAACACCTTGATCGACAAAGAGAGCAAATCACGGCTCTTATAACAGAAAATGATGATGACGGTGTAAGCCTATGCAATTGCAATTGCTCTTCTTGGTCGCGCTTGTGGGAAAATTGCTTCTCCTGGCTCGTTCGGCATATAAAGAATAATAATAATAATAATAATAATAACAATGATGATGATGATGATTATGATTGTGATTACTTTGATGAAGCTTTGAGGGAGGATTTGAATGAGACGCTTGAGAAGTTGAGAGAGATTATTGAAGTGCTTAAATGTGGCTGTGTTTCGGAAAGGAGGGGGGTATTTGGTGTTCCAGAGAAGCGAGGGTTCACGGTGGGATTGGAGGAGTCAATGAGGAAATTGAAGGCGGAGGTTATGAGGGAGAGGGATGGCGTGTCTGTCATTGTTTTGACCGGCTTGGCTGGTTCTGGGAAGACCACTTTGGCTACCTCGCTCTGTTGGGATCAACAAGTCAAAGGTAAATTCAAGGAAAATATCTTATTCATCACATGCTCGAAAACATTCAAGATAAAGATAATTGTAGAGAGACTCTTTGAACACTWTGGATATCGAGTGCCAGAGTTTCAAAGCGAAGAAGATGCAATTAACCGAATGGGAGTTTTGCTGAGGCATATTGGAAAAAGTAGTCCAATGTTGTTGGTCCTTGATGATGTTTGGCCTGGTTCAGAATCCCTTGTTGAGAAATTCAAAATACAAACATCATCAGATTACAAGATTCTGGTTACTTCAAGGGTTGCATATCCTAGATTTGGCACCCCATGTATCGTCTTAGAACCACTCAATCATGAAGATGCATTAACACTTTTCAGTCACTTTGCCCAATTGGAAGATAACTACTACTCAATTTTCCAAAATGATGAAGATATTCTCCAAAAGGTTGTAAGAGGTTGCAAGGGTTCACCTCTTGCGATTACTGTGATTGGTAGATCAATAAGAACTCAACCTTATGAATTTTGGCTCAAGATGGTAGAGAAATTGTCACAGGGTCGTTTTATATTTGATTCGAGTGAGGAATTACTAAAATGCCTCGAAAATATTTTGGAAATTTTAGAGGATAAGCCTATCATAAAGGAGTGCTTCATGGACCTAGGGCTATTTCCCGAAGATCAAAGAATCCCTGTTACTGTTCTCTTGGATATATGGACTGAGTTGTATGGAATGGATGATGATGGCATAGAGGCAATGACTATTATCAACACATTAAACTCTATGAATTTGGCTAATGTCTTAGTTTCAAGGAAAAATGCTTGCGACGTTGAAAACTATTACTACAACAACCACTTCATGTGGTGCATGATCTTCTAA 1509 0.4023 MAHTTQIAVLASLLQQASESILEMLQTARKSNRNRGVLRSVILTELTPLFNEIKQYNYDDEHLDRQREQITALITENDDDGVSLCNCNCSSWSRLWENCFSWLVRHIKNNNNNNNNNNDDDDDYDCDYFDEALREDLNETLEKLREIIEVLKCGCVSERRGVFGVPEKRGFTVGLEESMRKLKAEVMRERDGVSVIVLTGLAGSGKTTLATSLCWDQQVKGKFKENILFITCSKTFKIKIIVERLFEHXGYRVPEFQSEEDAINRMGVLLRHIGKSSPMLLVLDDVWPGSESLVEKFKIQTSSDYKILVTSRVAYPRFGTPCIVLEPLNHEDALTLFSHFAQLEDNYYSIFQNDEDILQKVVRGCKGSPLAITVIGRSIRTQPYEFWLKMVEKLSQGRFIFDSSEELLKCLENILEILEDKPIIKECFMDLGLFPEDQRIPVTVLLDIWTELYGMDDDGIEAMTIINTLNSMNLANVLVSRKNACDVENYYYNNHFMWCMIF* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0697 502 Pfam NB-ARC domain 176 405 IPR002182 GO:0043531
Amo11g0697 502 Coils Coil 401 421 - -
Amo11g0697 502 PRINTS Disease resistance protein signature 273 287 - -
Amo11g0697 502 PRINTS Disease resistance protein signature 365 379 - -
Amo11g0697 502 PRINTS Disease resistance protein signature 195 210 - -
Amo11g0697 502 Coils Coil 134 154 - -
Amo11g0697 502 Gene3D - 155 315 IPR027417 -
Amo11g0697 502 Gene3D - 413 499 IPR036388 -
Amo11g0697 502 Gene3D - 327 412 IPR042197 -
Amo11g0697 502 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 8 497 IPR039203 GO:0050832
Amo11g0697 502 CDD AAA 173 286 - -
Amo11g0697 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 431 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0697 Amo-Chr11 14014757 14027126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0697 173 392 WRKY Transcription Factor Family AT5G45050 25.105 9.49e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0697 - - pvu:PHAVU_006G0277000 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0040 01 998190 1007902 Amo11g0697 11 14014757 14027126 hybridization