Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0688 ATGGATCTTGCACTTAATAATGGCTTTGAATGGATAGTGGCAGCGAAGGGAACTCAGACTTTTCAGATCAATAGACTGATGGATGGAGTAGTGAGTCTGATGAGGAAGAGGTCTCTAAAAGGGGACGAGGGTGGCAGATTACCTTCATCGGAGTCACCAGGTAGTTCAGGCAATCAAATAAGTGATGATGTGGACACTTCGATGCTTTCAATCGCGGCTGCATTGGCTGATGTTGAATTTCATGGGGTTGAAGAGGCTTATGCAAGATATGTGGAGTATGCAAAGGCGACTAGATTTGCTGTTCGAAAAGGGGATTCCATTAAAGATGATGAAGGCAATGTTGTGAGGAAATTTTTCTATTGCAATCAACAGGGCTTGCCGAAGAAGAAGCATTATGAGAGGGCGGATAGGAAGAGGGCGCATAAGGCGGAGACTAGGACCAGCTGCAATGCGAAGTTCGTTGTGTTCTTAGACAAACAGAATGGCAAGTGGAGGATGAAGACATTTGTTCAAGATCACAATCATGATTTGACTTTGCCTGCTTTCACTAATGTGATGGCATCTCACAGCAACATCAACGAAGAGTTGGAGAAAGATGCCTTGTCGATGCGGTTGGAGCTGAAAAAGTGGTGTAAAGATGCTAAGTCTAGATCATTCCATGACTCGGATGGAGATGGTTGCGATATTTTGGATCCGAAGATTATCAAGTCAAAAGGTGCACCGCGGTCGACCAGCAATGGCAGAATGGGTAGGCGGTGCAAGCGTTGCCACGGTTTCGGACATGACCGACGAAATTGCACAACAAACAAGGAGGACATATTAGATGAGGTGCTTCTCATGTAA 843 0.4531 MDLALNNGFEWIVAAKGTQTFQINRLMDGVVSLMRKRSLKGDEGGRLPSSESPGSSGNQISDDVDTSMLSIAAALADVEFHGVEEAYARYVEYAKATRFAVRKGDSIKDDEGNVVRKFFYCNQQGLPKKKHYERADRKRAHKAETRTSCNAKFVVFLDKQNGKWRMKTFVQDHNHDLTLPAFTNVMASHSNINEELEKDALSMRLELKKWCKDAKSRSFHDSDGDGCDILDPKIIKSKGAPRSTSNGRMGRRCKRCHGFGHDRRNCTTNKEDILDEVLLM* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0688 280 Pfam FAR1 DNA-binding domain 90 178 IPR004330 -
Amo11g0688 280 MobiDBLite consensus disorder prediction 40 61 - -
Amo11g0688 280 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 77 206 - -
Amo11g0688 280 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 77 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0688 Amo-Chr11 13513391 13518092 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g0688 FAR1 3.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0688 - - ahf:114924656 317.005