Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0679 ATGTTTCATTCCCATACAAAGCTTTCTATTCTCCTCCTTCTCACAACAATCTTGGTGTTGTTCAACACAACAAGAGGCAAGAACCACAATAACTGCAACCGTAGTTGCGGAGAATATTCCTTGCCGTACCCTTTTGGTTTCTCTGATGATTGCGAAATCAAACTTAACTGCACCACCACCAACAGAAACAAGAGAGTCCAAATTGGAAATCTACAAGTCCAGAACGTAACATCTGAAAGCATATTCATCACTCTCCCGGCCGAATGCAACCGGGGAAAGGATTTTATAGAACCCCTCTTCGGAGAAAACTATGGTCCAACATGGAACAACAGCTTCCTCGTACAAGGCTGTGAACACGAGCTTGGAGGCTGCAATATCCCAATAGCTAGTTTCATTGGGAGCCAGACTGAGATTAAAGGGTGTGATAGAAGAACTGAAAACATTAGTTGCTTCACAAAACCGCGGCATCAAAAGGAACGTGCCGATGTTGTGAGCGTTACGGATTGGCGAGGAATTGGGTGCAGGTCGTTGTTTTCTGCTTTTGCTTTTGATAAGAGTAAAGAGGTATCGCTGCAGTTTCAGGTGGTTGAGTTGGGGTGGTGGCTTCAAGGGTCGTGTGGGATTTGTTCTGAGAATGCGAATTGTGATAAGGTCAATGTTGGAGCAAGTAAGAACGGGTTCAGGTGCCACTGCCATGACGGTTTCAGAGGAGATGGCTTCAACAACGGTACCGGTTGCCAGAAAGTTTCTTATTGCAAGGGCTCAAGATTGAAGTTTGGAAGATGCGGGGAAGGAATCAAAATTGGTGTCCTTAGTGGAGCTGTGTCTCTGGTATGTTACTTCACCAGGCGCCGCGCCAATTGGCTGCGAAAACAAGTTCGAGCAAAGCATATATTACAAGAAGCTGCAGGCAACAACAGTGTCCCTTTCTACCCTTACAAGGAAATAGAAAGAGCCACAGATTTTTTCTCTGAWAAAAACAGGTTGGGAACTGGGGCTTTTGGTACAGTTTATGCTGGAAACCTTCACAATGATGAGTGGGTTGCTATAAAAAAGATCAAATACAGGGACACCAATAGTATTGACCAAGTAATGAATGAGATCAAGTTACTATCTTCGGTGAGTCATCCYAATTTAGTCCGCCTCCTCGGCTGCTGCGTAGAGGAAGGAGAACAGATACTTGTTTACGAGTACATGCCGAATGGAACTCTATCACAACATTTGCAGAGGGAGAGGGGTGGAGTACTTTCTTGGACAGTAAGGCTCACAATTGCAACTGAAACCGCCAACGCCATTGCATATCTCCACTCTGCAATAGATCCTCCAATTTATCACAGAGACATCAAATCCAGTAACATACTCTTGGACTATAACTTCCAATCAAAAGTTGCAGACTTTGGCCTTTCCAGGATTGGCATGACAGAAACCTCTCATATCTCGACAGCGCCGCAGGGGACACCTGGCTATGTTGACCCTCAATACCATCAGAATTTCCATCTTTCTGATAAAAGCGATGTGTATAGCTTTGGAGTGGTTCTTGTTGAGATAATAACTGCCATGAAAGTGGTTGATTTCGCAAGGGCTCGTAGCGAGATTAATTTGGCTGCACTTGCTGTTGATAGGATTAGGCGTGGATTGGTAGATGAGATCATTGATCCCTACCTTGAACCACATAGAGATGCTTGGACTCTCTACTCTGTTCACAAGGTAGCCGAGCTTGCGTTTCGATGCCTGGCTTTTCATAGCGACATGAGGCCAACCATGATGGAAGTTGCCGAGGAGCTAGAACACATCAGACGAAGCGGTTGGACGACTATGGAAGAAACCATCTACATGGCTTCACCGGCCGTGTCCGCCTGTTCGTCGCCTCGAAACAGAAGCCAGAAATCAATGAATAGTGTCCATTTTGAGAGAGGGGGACAAGAGAGTGAGGCATTTAGTGTTGTTCCATTGGAAGAGGTAAGGGAGAGTTCCCCTGTTTCTGTGCATGTTGCTTGGTTAAGTGGACCTAGCTCACCCTCAACTAATAGCTTGTTGGGAAATGTAGTTCAGTGA 2055 0.4545 MFHSHTKLSILLLLTTILVLFNTTRGKNHNNCNRSCGEYSLPYPFGFSDDCEIKLNCTTTNRNKRVQIGNLQVQNVTSESIFITLPAECNRGKDFIEPLFGENYGPTWNNSFLVQGCEHELGGCNIPIASFIGSQTEIKGCDRRTENISCFTKPRHQKERADVVSVTDWRGIGCRSLFSAFAFDKSKEVSLQFQVVELGWWLQGSCGICSENANCDKVNVGASKNGFRCHCHDGFRGDGFNNGTGCQKVSYCKGSRLKFGRCGEGIKIGVLSGAVSLVCYFTRRRANWLRKQVRAKHILQEAAGNNSVPFYPYKEIERATDFFSXKNRLGTGAFGTVYAGNLHNDEWVAIKKIKYRDTNSIDQVMNEIKLLSSVSHPNLVRLLGCCVEEGEQILVYEYMPNGTLSQHLQRERGGVLSWTVRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYNFQSKVADFGLSRIGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARARSEINLAALAVDRIRRGLVDEIIDPYLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMMEVAEELEHIRRSGWTTMEETIYMASPAVSACSSPRNRSQKSMNSVHFERGGQESEAFSVVPLEEVRESSPVSVHVAWLSGPSSPSTNSLLGNVVQ* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0679 684 ProSiteProfiles Protein kinase domain profile. 323 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0679 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Amo11g0679 684 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 635 IPR045274 GO:0007166
Amo11g0679 684 Gene3D Laminin 208 242 - -
Amo11g0679 684 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524
Amo11g0679 684 SMART serkin_6 323 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0679 684 Gene3D Phosphorylase Kinase; domain 1 283 398 - -
Amo11g0679 684 Gene3D Transferase(Phosphotransferase) domain 1 399 614 - -
Amo11g0679 684 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 23 635 - -
Amo11g0679 684 Pfam Protein kinase domain 324 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0679 684 SUPERFAMILY Protein kinase-like (PK-like) 305 596 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0679 Amo-Chr11 13131504 13137004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0679 7 682 Receptor kinase-like Gene Family AT2G23450 53.934 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo11g0679 Pkinase 8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0679 - - gmx:100810861 979.548