Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0675 ATGGGCAACTTGGTCATTGCATACATTATTTTAGCCTTTTATTCTCTCTTCATTATTGTGCATGGCACTGATAAGTTATCATGCAATCAAACTCCATATCCCACTCTTTGTAACCATTACATTGGCACTACCAATTATTCAATTTCATCATCATCAAGTGATGTTTCCTCTTCTTATTATTCCTTCCATGACCTGGCCCTTAAGGTCACCAGGGACCAAGCAATAGTAGCACACAAACTTGTCTCATCAACCATGGAATCCAACGATTTCAAAGACAAGAGAGCCAAGTCCGCATGGGAAGATTGTTTGGAACTCTATGAGAATACAATATATCAGCTGAACCGTTCAATGAGCTCAAACAATCTAAACGACAGGTTAACATGGCAAAGTGCTTCTATTGCGAATCAACAAACATGCCAAAACGGTTTTCTTGATTCTAACCTTTCATCTCACTACCTAAACTACTTTCCATCCATTTCAAGCAACTTATCCAAGTTGCTGAGCAACTCTTTGGCCATTAGCAATACATTAACGTCCTTGACTTCGTTACCAAAAGACCCGGTTGTTGGCGGCGGTCGAAAATTGCTTTCCTTTAATGGCTTCCCAGAGTGGCTATCTCCTTCCGACAGGAGGCTTCTTCAGGCTTTGCCGGGAACGGCGGCACCGAAGGCGGACATTGTGGTGGCACAGGACGGGAGTGGGAATTACAAGAGTGTTTCGGAGGGCGTGGCGGCGGCGGGTAGGGTGAGTAAGAATGGTCGAGTGGTTGTGTACGTGAAAGCTGGTGTTTACCGGGAGAGTGTGAACATAAAGGGAGGTATAAAGAATTTGATGATGTTTGGGGATGGTATTGGAGCTACCATTATTACGGGTAGCAAGAATTATCAAGACGGCTCCACCACTGTTGGTTCAGCTACTTTTACGGTGTCGAGTGATGGGTTCATCGCCAGGGACCTGACAATTGAGAACAGTGCTGGGCCACAGAAGCACCAAGCGGTGGCACTTCTTTCCAGCTCTGATCACTCCGTGTTCTATCGGTGTAGCTTCAGAGGCTACCAAGACACCTTATACGTCCTTTCCCAACGCCAATTCTACCGCGACTGCGACATCTACGGCACCATAGACTTCATCTTTGGTGACGCCGTCGCCCTCTTCCAAAACTGCAACATCTTCTTGAGAAAACCAATGAGTAAGCAACAGAACGCAGTGACAGCACAAGGGAGAACCGATCCCAACGAGAACACCGGCATTGTCATCCACAACTGCCGTATCATGGCGGCTTCAGATCTGAAGCCAGTTCAGGGATCTGTCAAGTGCTTCCTCGGCCGGCCGTGGCAGAAGTACTCAAGAACGGTGGTGGTCAAGAGTAGCCTGGACGGTTTGATTCAACCGGCAGGGTGGATGCCATGGGCGGGAAGCTTTGCRTTGAATACATTGTATTATGGAGAGTATATGAATATTGGAGCTGGTGCTAACACTGCAGGGAGGGTTAAATGGCCTGGCTTTCATGTTATTACCAACCCTACTGAGGCTTTGAAATTTACTGTTGCTAATTTCTTGGATGGTGGATCGTGGATTCCTGGGACTGGTGTTCCGTTTGAAACTGGCCTTTGA 1614 0.469 MGNLVIAYIILAFYSLFIIVHGTDKLSCNQTPYPTLCNHYIGTTNYSISSSSSDVSSSYYSFHDLALKVTRDQAIVAHKLVSSTMESNDFKDKRAKSAWEDCLELYENTIYQLNRSMSSNNLNDRLTWQSASIANQQTCQNGFLDSNLSSHYLNYFPSISSNLSKLLSNSLAISNTLTSLTSLPKDPVVGGGRKLLSFNGFPEWLSPSDRRLLQALPGTAAPKADIVVAQDGSGNYKSVSEGVAAAGRVSKNGRVVVYVKAGVYRESVNIKGGIKNLMMFGDGIGATIITGSKNYQDGSTTVGSATFTVSSDGFIARDLTIENSAGPQKHQAVALLSSSDHSVFYRCSFRGYQDTLYVLSQRQFYRDCDIYGTIDFIFGDAVALFQNCNIFLRKPMSKQQNAVTAQGRTDPNENTGIVIHNCRIMAASDLKPVQGSVKCFLGRPWQKYSRTVVVKSSLDGLIQPAGWMPWAGSFALNTLYYGEYMNIGAGANTAGRVKWPGFHVITNPTEALKFTVANFLDGGSWIPGTGVPFETGL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0675 537 Gene3D - 219 537 IPR012334 -
Amo11g0675 537 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 178 IPR035513 -
Amo11g0675 537 ProSitePatterns Pectinesterase signature 2. 370 379 IPR033131 -
Amo11g0675 537 CDD PMEI-like_3 26 179 - -
Amo11g0675 537 Pfam Pectinesterase 225 522 IPR000070 GO:0030599|GO:0042545
Amo11g0675 537 SUPERFAMILY Pectin lyase-like 219 535 IPR011050 -
Amo11g0675 537 SMART PMEI_2 19 173 IPR006501 GO:0004857
Amo11g0675 537 PANTHER PECTINESTERASE 19 536 - -
Amo11g0675 537 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 19 536 - -
Amo11g0675 537 Pfam Plant invertase/pectin methylesterase inhibitor 27 173 IPR006501 GO:0004857
Amo11g0675 537 TIGRFAM PME_inhib: pectinesterase inhibitor domain 27 178 IPR006501 GO:0004857
Amo11g0675 537 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 178 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0675 Amo-Chr11 12823745 12826297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0675 27 537 Carbohydrate Esterase AT1G23200 53.371 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0675 - - lja:Lj4g3v3099630.1 738.413