Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0640 ATGGAGCTAACGAGACATTTCATAGACGTAACCGTTTTGGTCTTACTATCCATGAACGTTGGAAATTCCAGAGACACTATCACACCCTCAGATCCCCTAAATGGACCAGAAACTTTAAGCTCTAATAATGGCATGTTCCACCTTGGATTCTTCACGCCAACAAACTCCTCCTACCTCGGAATCTGGTACATGTCGAACCCTCCTGTGGTGTGGGTTGCCAACAGAGACCAACCTATAAAGGATTCTTCTTCTGCTTTACTCCAAATATCTCAGGATGGAAACCTTCTTCTCATGGATAATGCAAACAACAGTAGGATTCTTGTTTGGTCAACAAACCTCTCCAATATTTCATCCAACACAACGGCGCAGCTTCTTAACACCGGCAACCTTGTGCTGCAAGAAAACACCACAGGAAGGTTCCTATGGCAGAGTGTCCAACACCCTACAAACACGTTATTGCAGAAAATGCAGCTCAGCACAAACAGGATCACTGGTGAGAAAGTAAAACTCACTTCCTGGAGAACTCCTCAGGATCCATCCATTGGAGACTTCTCCTTGAGTCTCGAAGGCCTTAGTAGCCCTGAAATGGTCGTCTGGAAGGGAGTTCAACCTTACTGGCGTACCGGTCCGTGGAACGGTGTAACTTTTCTTGGAATACCTGGAGATAACATAAACAATCTTGATGGATTTTACTTGGAAAAATCGTATGATGATAACGGCACTTACTATCTTTCTTTCACCTTTGCAAATCAGTCCTTGTTGTTGATCTGTGTGTTAACAGCYGATGGAAACATGAAAGACTATTATTGGGATTATGGGAAGAGAAATTGGTCAATCGTATGGACAGCTATTAACTCAGAGTGTGATGTTTATGGAAAGTGTGGAGTATTTGGAATCTGTGATCCCACAAGTGAACCTATTTGTAGCTGCTTAACAGGGTTTGAACCAAAGAATGCTACTGAATGGAATCGGCAAAATTGGAGTAGCGGTTGTGTTAGGAAGAAAGCTCTTCAGTGTGAAGAGAATGGGTTTGTGAAGTTGCAGAATACTAAGACACCAGACTTTGTAGAGTGGTTCTCTCCTACTGAATATGATTGCAGAACTCAGTGCATTGGAAACTGCTCTTGTGAAGCATATGCATATGATGCTGGTATTGGTTGCATGCTATGGGGTGGGAACCTAATTGACATTCAAAGGTTCTCAAGTGGAGGAACAGATCTTTATATTCGGGTCCCCAATTCAGATCTTGGTAAAAAGAAAAATAATGTAACAGTGATCATCTCAGTTACAGTCACGGTAGGAGTGATTGTCCTTGTGTCATGCACATTTATCTTGTGGAAAAGAACTTCAAGGAAAGATAGAGCAAATTCCAGAGTTCAGGTCAGAATTCAGAAAAATGAGCTTCTTGAGCTTTCACAGTTTGAGTTTGAAAGGCTTGCTATAGCAACAAACAACTTTCACTTAGATAATAAGCTAGGACAAGGGGGTTTTGGACCAGTATATAAGGGTACATTGGAAGATGGGCAGGAAATAGCAGTTAAAAGGCTTTCAAGAGCATCTGGACAAGGGCTAGAAGAATTTATGAATGAGGTGTTGGTAATATCAAAGCTTCAACATCGAAATCTTGTCAGACTTCTTGGATGTTGTATAGAAAGAGATGAAAAGATTTTGATCTATGAATACATGCCAAATAGGAGTCTTGATGCATATATGTTTGATCCATCTAAACAGATTCTAAGTTGGGAACAACGTTTTGATATAATCGAAGGAATAGCTCGTGGCTTACTTTATCTTCACAGAGATTCTAGATTAAGGATTATACATAGAGATTTGAAGTTAAGCAATATATTACTTGATGGAGAATTAAATGCTAAAATTTCAGACTTTGGCATGGCAAAGATTTTTGGTTACACGGAAGATGAGGCTAATACTCGAAGGGTTGTCGGAACATTTGGTTATATGCCACCGGAATATGTTATGGAAGGACTATTTTCAGAAAAATCCGATGTATTCAGTTTCGGTGTTTTATTATTGGAGATCGTTAGCAAGAGAAAAAATACTAGTTTTTATGAAGATGCAGAATCTCTAAGCCTTATTGGATTTGCATGGAAATTGTGGAATGATGATAAGATTACAGCTCTAATAGATCCAGAAGTAGCAAACATGAGTAGTCTTGCAGATATAATGAGGTGCATTCACATTGGGCTTTTGTGTGTGCAAGAACTTGCAAGGGATAGACCTACTATGACTGCAGTGATTTCAATGCTTAATAGTGAAACTGTTAATCTTCCTCTGCCGAAGCAGCCAGCATTCATGCATAGGCAGACAATGTTGGATATAGAGTCTTCTCATAGAAGTGATGGATCATATTCCATCAATTATATCAGCTTAACAAACATCCAAGGAAGGTAG 2412 0.398 MELTRHFIDVTVLVLLSMNVGNSRDTITPSDPLNGPETLSSNNGMFHLGFFTPTNSSYLGIWYMSNPPVVWVANRDQPIKDSSSALLQISQDGNLLLMDNANNSRILVWSTNLSNISSNTTAQLLNTGNLVLQENTTGRFLWQSVQHPTNTLLQKMQLSTNRITGEKVKLTSWRTPQDPSIGDFSLSLEGLSSPEMVVWKGVQPYWRTGPWNGVTFLGIPGDNINNLDGFYLEKSYDDNGTYYLSFTFANQSLLLICVLTADGNMKDYYWDYGKRNWSIVWTAINSECDVYGKCGVFGICDPTSEPICSCLTGFEPKNATEWNRQNWSSGCVRKKALQCEENGFVKLQNTKTPDFVEWFSPTEYDCRTQCIGNCSCEAYAYDAGIGCMLWGGNLIDIQRFSSGGTDLYIRVPNSDLGKKKNNVTVIISVTVTVGVIVLVSCTFILWKRTSRKDRANSRVQVRIQKNELLELSQFEFERLAIATNNFHLDNKLGQGGFGPVYKGTLEDGQEIAVKRLSRASGQGLEEFMNEVLVISKLQHRNLVRLLGCCIERDEKILIYEYMPNRSLDAYMFDPSKQILSWEQRFDIIEGIARGLLYLHRDSRLRIIHRDLKLSNILLDGELNAKISDFGMAKIFGYTEDEANTRRVVGTFGYMPPEYVMEGLFSEKSDVFSFGVLLLEIVSKRKNTSFYEDAESLSLIGFAWKLWNDDKITALIDPEVANMSSLADIMRCIHIGLLCVQELARDRPTMTAVISMLNSETVNLPLPKQPAFMHRQTMLDIESSHRSDGSYSINYISLTNIQGR* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0640 803 ProSiteProfiles PAN/Apple domain profile. 339 412 IPR003609 -
Amo11g0640 803 Pfam Protein tyrosine and serine/threonine kinase 487 756 IPR001245 GO:0004672|GO:0006468
Amo11g0640 803 Gene3D - 19 146 IPR036426 -
Amo11g0640 803 Gene3D Phosphorylase Kinase; domain 1 445 561 - -
Amo11g0640 803 ProSiteProfiles Protein kinase domain profile. 486 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0640 803 Gene3D Transferase(Phosphotransferase) domain 1 562 764 - -
Amo11g0640 803 CDD B_lectin 30 148 IPR001480 -
Amo11g0640 803 SMART serkin_6 486 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0640 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Amo11g0640 803 Pfam PAN-like domain 339 397 IPR003609 -
Amo11g0640 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 213 IPR036426 -
Amo11g0640 803 Pfam S-locus glycoprotein domain 206 318 IPR000858 GO:0048544
Amo11g0640 803 PIRSF SRK 1 803 IPR024171 GO:0004674
Amo11g0640 803 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Amo11g0640 803 CDD STKc_IRAK 492 757 - -
Amo11g0640 803 SMART ntp_6 339 411 IPR003609 -
Amo11g0640 803 Pfam D-mannose binding lectin 69 174 IPR001480 -
Amo11g0640 803 SMART blect_4 30 148 IPR001480 -
Amo11g0640 803 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 802 - -
Amo11g0640 803 CDD PAN_AP_plant 337 412 - -
Amo11g0640 803 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 802 - -
Amo11g0640 803 Pfam Domain of unknown function (DUF3403) 758 803 IPR021820 GO:0004674
Amo11g0640 803 SUPERFAMILY Protein kinase-like (PK-like) 472 788 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0640 Amo-Chr11 12084767 12088392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0640 414 803 Receptor kinase-like Gene Family AT3G45860 48.878 1.13e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo11g0640 PK_Tyr_Ser-Thr 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0640 - - ahf:112714694 1588.55