Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0630 ATGTATTTCTATTGTTATGGTTTGTTGGTTATAGAATACACTCTTCCGAAGTTGTACGTGAAGATGCAGTATTGTGTTTCCTGTGCCATCCACTCTCATGTCGTGAGGGTGCGTTCTCGCACCGATAGGAAGAACCGCGAGCCGCCACAGCGCTTTGCTAGGCGTAGAGATGATGCACCAAGGCCCGGTCAGCCTGGTCAAGCACCTCGTCCTACTGGTGGATTAGGAGCTACCCCTCGATATATTGGAGGCTGA 255 0.5059 MYFYCYGLLVIEYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRKNREPPQRFARRRDDAPRPGQPGQAPRPTGGLGATPRYIGG* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0630 84 Pfam Ribosomal protein S26e 12 57 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo11g0630 84 MobiDBLite consensus disorder prediction 40 61 - -
Amo11g0630 84 PANTHER 40S RIBOSOMAL PROTEIN S26 12 78 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo11g0630 84 PANTHER 40S RIBOSOMAL PROTEIN S26 12 78 - -
Amo11g0630 84 ProSitePatterns Ribosomal protein S26e signature. 24 31 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo11g0630 84 MobiDBLite consensus disorder prediction 37 84 - -
Amo11g0630 84 Gene3D Ribosomal protein S26e 8 65 IPR038551 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0630 Amo-Chr11 11765081 11766014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0630 13 67 Cytoplasmic Ribosomal Protein Gene Family AT2G40510 80.000 2.52e-27 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0630 K02976 - gmx:100784958 108.612