Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0607 ATGCTCTTGGTGAAGACTATTCTGTTTGTTGCCAAGGAACTGCTTTTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTAATTCTAATGCCAAAGCCTTCAAGAGAGACGAGGATAGGGATGGCCAAGCAACCATAATCGCAGTAAGGCCGATTCGAAAAGGAAAAGAGGTTGTTGTGTATAGTAATGCTTCTAATAGCAATGAGCAACATGGCATGGAGATCAATTATGCTCGTGTTGCAGTAGAGGAAGACGTGGCAAAGAACATCAAAGATCTCTTTGAGCAGTTTGATGGGAAAGATACTAATGCTACTGATATGGGAAAGAAGGGTAGTTGGTTTTCTGCAATAACGAGGGTTTTCACACACCACTCCAAGGAGAAGCAAGTACCTAATGCTTGGTTTTCTTGTTACTGA 417 0.4173 MLLVKTILFVAKELLFFPLQSCMNHSCNSNAKAFKRDEDRDGQATIIAVRPIRKGKEVVVYSNASNSNEQHGMEINYARVAVEEDVAKNIKDLFEQFDGKDTNATDMGKKGSWFSAITRVFTHHSKEKQVPNAWFSCY* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0607 138 Pfam SET domain 17 58 IPR001214 GO:0005515
Amo11g0607 138 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 60 IPR044237 GO:0008168
Amo11g0607 138 Gene3D SET domain 9 61 IPR046341 -
Amo11g0607 138 SUPERFAMILY SET domain 15 60 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0607 Amo-Chr11 11073006 11074751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0607 107 132 IQD Protein Family AT3G59690 84.615 1.64e-08 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo11g0607 SET 1.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0607 - - aip:107639526 92.4337