Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0593 ATGCCCCATGGATCTCCAACAAAGGAAGAGTTAAGAAAAGAAAGAAAAAGAGAGGCCAACAGAAAATGTGCTCAGAGGAAGAGAAAGAGAGAACAGGAAGCATTCCAAGAGCTCGAAGGATCCGTGGCAAAGCTTAGAACTGAAGTCCAATTACTCCATGAAGAACTTACTAGACTTCACAAGGAAAATAAGGAACTCGACCAGGAAAATAACTCCATTCAAGAAGAAATTTTCAAGATGCATGGGATGAAATTATCAGCAAAATTTGTGATCAGTTCTGCTGTTGATGAAGTTTAG 297 0.3939 MPHGSPTKEELRKERKREANRKCAQRKRKREQEAFQELEGSVAKLRTEVQLLHEELTRLHKENKELDQENNSIQEEIFKMHGMKLSAKFVISSAVDEV* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0593 98 Gene3D - 11 62 - -
Amo11g0593 98 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 10 73 IPR004827 GO:0003700|GO:0006355
Amo11g0593 98 SMART brlzneu 8 72 IPR004827 GO:0003700|GO:0006355
Amo11g0593 98 MobiDBLite consensus disorder prediction 1 32 - -
Amo11g0593 98 Coils Coil 21 76 - -
Amo11g0593 98 Pfam bZIP transcription factor 9 70 IPR004827 GO:0003700|GO:0006355
Amo11g0593 98 MobiDBLite consensus disorder prediction 1 18 - -
Amo11g0593 98 SUPERFAMILY Leucine zipper domain 11 67 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0593 4 94 bZIP Transcription Factor Family AT4G36730 36.559 6.29e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo11g0593 bZIP_1 3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0593 - K11499 aip:107625334 189.889