Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0587 ATGAAGAACACTTTTGCTCTTTGTTCTTATTTACTCCTCCTTGTTACCCTTTTGGGTCTAGTATTCTCAAATTGCAAAGCCAACCAAGTTGATAACCTTGATGAGTTGATTAATTCAAGAAGCTCAGAGAATCCTCCTAAGACTCTTTCTTGGACAAAAGAAGATGCATACATACCAAAATATTATTATACTTCTTCTATTGATCCATCTCCATCACAAGAGGAGCAAAAGTTGGCTGATAAAATAACTGCATTGCCAGGTCAACCATATTATGGGTCAAATTTTGACCAATATGCAGGGTATGTTACTGTTGATCCAAATGCTGGGAGAGATCTTTTCTATTATTTTGTGGAGTCTCCAGCTAATTTCTCTCAGTACAACCCTTTGGTTTTGTGGCTCAATGGAGTGGCTAATGTTCTGTTCTTGGAATCCCCTGCTGGAGTGGGATTCTCGTACGCACAAAATGATTCACAAACATTTTTCCATACTTCCGGTGACAAGGCTGCTGCAAAGGATGCCTACGTGTTCCTGGTTAACTGGCTAGACCGGTTTCCAGAGTACAAAGACCGTGAAATTTACATCACTGGCGAGAGCTATGCCGGTCACTATGTGCCTCAGCTTGCATATACTATTGTTGTCAACAATCTTTTCAGACAAATTGCCAACCAATCTGCTATCAACCTTCAAGGCATTGCTATAGGGAACCCATGGGTTGATGATTTTACTGGTGTAAAGGGGTTATTTGATTACCTCTGGACTCATGCTTTGAACTCAGACCAAACTCATGAGCTCATTGAGAGATACTGTGACTTCAAATCCCAATCCGTTTCCTCTATTTGTATCAATGCAACAAGAAATGCCTTCGCTGAGAAAGGACCCATTGACTCCTATAATATATACGCACCACTGTGTCACGACACCTCTCTCAAATCTTCTCAAACTGGTTCTGTATACAATTACGACCCATGCTCTAATGTGTACGTGCAAGCCTATCTAAATAGGCCAGAGGTCCAACAAGCTCTTCATGCAAAACCCACACAATGGAGCCACTGCAGTGGTGATGTAGATTCAAGAGTGTCAGTCACAGCTACCAGATATGCACTCAACGTCCTCAAGCTCCCTATTGTGACCCCTTGGTATCCATGGTATTCTGAAAACGAGATTGGAGGATATGCGGTGCAATACAAAGGATTGGCATTTGCGACAGTGAGAGGAGCAGGGCATATGGTTCCAAGCTGGCAGCCAGAACGGGCTTTCAACTTGATCTTAGCATTCCTCAGTGGATATCCCTCCCCTCCTGGTTCACCAAAATGA 1314 0.4277 MKNTFALCSYLLLLVTLLGLVFSNCKANQVDNLDELINSRSSENPPKTLSWTKEDAYIPKYYYTSSIDPSPSQEEQKLADKITALPGQPYYGSNFDQYAGYVTVDPNAGRDLFYYFVESPANFSQYNPLVLWLNGVANVLFLESPAGVGFSYAQNDSQTFFHTSGDKAAAKDAYVFLVNWLDRFPEYKDREIYITGESYAGHYVPQLAYTIVVNNLFRQIANQSAINLQGIAIGNPWVDDFTGVKGLFDYLWTHALNSDQTHELIERYCDFKSQSVSSICINATRNAFAEKGPIDSYNIYAPLCHDTSLKSSQTGSVYNYDPCSNVYVQAYLNRPEVQQALHAKPTQWSHCSGDVDSRVSVTATRYALNVLKLPIVTPWYPWYSENEIGGYAVQYKGLAFATVRGAGHMVPSWQPERAFNLILAFLSGYPSPPGSPK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0587 437 Gene3D alpha/beta hydrolase 73 136 IPR029058 -
Amo11g0587 437 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 135 IPR001563 GO:0004185|GO:0006508
Amo11g0587 437 Pfam Serine carboxypeptidase 93 135 IPR001563 GO:0004185|GO:0006508
Amo11g0587 437 Pfam Serine carboxypeptidase 136 355 IPR001563 GO:0004185|GO:0006508
Amo11g0587 437 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Amo11g0587 437 SUPERFAMILY alpha/beta-Hydrolases 85 430 IPR029058 -
Amo11g0587 437 PRINTS Carboxypeptidase C serine protease (S10) family signature 398 411 IPR001563 GO:0004185|GO:0006508
Amo11g0587 437 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Amo11g0587 437 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 152 IPR001563 GO:0004185|GO:0006508
Amo11g0587 437 Gene3D - 323 353 - -
Amo11g0587 437 ProSitePatterns Serine carboxypeptidases, histidine active site. 398 415 IPR033124 GO:0004185
Amo11g0587 437 Gene3D alpha/beta hydrolase 137 306 IPR029058 -
Amo11g0587 437 PANTHER CARBOXYPEPTIDASE 134 352 - -
Amo11g0587 437 PANTHER CARBOXYPEPTIDASE 21 135 - -
Amo11g0587 437 Gene3D - 354 430 - -
Amo11g0587 437 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 134 352 IPR001563 GO:0004185|GO:0006508
Amo11g0587 437 PANTHER CARBOXYPEPTIDASE 352 431 - -
Amo11g0587 437 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 352 431 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0587 Amo-Chr11 10617646 10622675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0587 352 430 Calmodulin-binding Proteins AT2G22960 35.000 1.79e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0587 K16297 - gmx:100779407 543.502