Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0582 ATGGATTCTGAAAACTATGATTTGGATGAGTTTTTGGCTTCCATTTCTTTTGATTTTTTATATGATTCGAACCCCAACAACCCTTCAGTTTCCATATATGAATTGGATTCTTTGCATGAACCTCAATTGTCACTGTCAGATATGGATCATAATAATGGTTTGGTTTTGAAGTGTAACGGTTCTACGAAATGCTTCACTGACCAAGACCCATTTTTTGATCCATTGGAGGAACAAGTGTTATATGAATCAGCATTGACCTCATTGTGCATAACGAACAACTCAATGGAAAATCAACATTCTAATCAAGTGATTATGGCAGAAGCTGATTTTCCATCAAGTTCTGAGGTATCCAAGAATTTGTTAGAGCCAATTGATGTGTCAGAAGAGTTCTTGAACTTCACTTCAGTGGACGATATTTGCCAATGGTTTGATCCTTCACAAGAGGATAATAACTCAAACACCTTTTTAGAACCAATGCAATGTGATGCTACTTCTTTTTCTTGGAAATCAGTTATGGATAGCTATGAGAATTGTCTATTGGGAAGCAAGGAACCCGAGTCGAATTTGATCGCACCGGCGGCGAGTTCTGCTGATGATACTACCATCTTTGAATGCCTATCAGAGTTTGATTTTGATGTGCCGACAATGTTATTCTCAGATTCATCAATTGAGGAGCTTTTGAATTGTGAAGAAGCAATTTGCAACAACCCTTTGAATAATGGTTCTAGTTCTGTTTTGGAGTTATCATCAGAAAACAATAAAATGGAGATGATGGAGAACATTTCAAATCCAATGAACTTCACAAAAAATCTTGCTTGGTTTGAGGCTAGAAACAACTTGACCCAGCCGGTTCCGGATTTGGACACAACAAACAAAATCAAGAGAAAGAAAGTGCAGCTAGGCTTGGTTATGGATGATAGTCATAGCATTAAGCTTGGGGAGACCATTCTTGTGCCGCCTCGGAAGAAAGAGGAGCCAAAAAAACCTAGCAAGAAGAAGGACAAGGCAGGGGTGGGTAGTCGGCCGCGGCCAAAAGATCGCCAGAGGATTCAAGACTGCATTCGACAATTGAGAACAATCATCCCTGGCAAGAATGTTAAAGAGTGTAGCATTGATAATTTGTTAGAGTGCTCCATCAGATACATGAGTTTCTTGTCAAGCACTGCACATTATGCAAACAAGCTACAAGAACCAGATAAGCCTAAGCTTATTGAGCAGGCAAATGGAGTGGTTCTACAAGAGAGTAGTGTGGAAGGTAGCAAATATTGTGGAACATGGTCATTTGAAGAGCCACATCAAACATTGTTATGCCCAATTATAGTTGAGGACATGTCTCATCCTGGCCAAATGCTTATAGAGTTGCTCTGTGAGGAGGAAGGGTTCTCTCTTGAGATGGTTGACACAATTAAGGGTCTTGGTTTAAATATCCTGAAAGCAAAGATGGAAACAAGGAATAAAAAACTATGGGCACGCTTTATTGTTGAGGCCAATAGACATGTTACAAAAATAGATGTGTTTTGGTCCCTTCTCCATCTTGTAGAGCAGAAAAACTCCTCAGGAACTGGAATGGATTCATCAACTAATAATAACAAGTATTGCAATGTAATGAATGATAGCAGTGTTTCAAGATTGGACAAACAACAACAAGAGAAAGAGAGTTGCAACCTTTTTATGTCCAGGACAGAGTAA 1689 0.3919 MDSENYDLDEFLASISFDFLYDSNPNNPSVSIYELDSLHEPQLSLSDMDHNNGLVLKCNGSTKCFTDQDPFFDPLEEQVLYESALTSLCITNNSMENQHSNQVIMAEADFPSSSEVSKNLLEPIDVSEEFLNFTSVDDICQWFDPSQEDNNSNTFLEPMQCDATSFSWKSVMDSYENCLLGSKEPESNLIAPAASSADDTTIFECLSEFDFDVPTMLFSDSSIEELLNCEEAICNNPLNNGSSSVLELSSENNKMEMMENISNPMNFTKNLAWFEARNNLTQPVPDLDTTNKIKRKKVQLGLVMDDSHSIKLGETILVPPRKKEEPKKPSKKKDKAGVGSRPRPKDRQRIQDCIRQLRTIIPGKNVKECSIDNLLECSIRYMSFLSSTAHYANKLQEPDKPKLIEQANGVVLQESSVEGSKYCGTWSFEEPHQTLLCPIIVEDMSHPGQMLIELLCEEEGFSLEMVDTIKGLGLNILKAKMETRNKKLWARFIVEANRHVTKIDVFWSLLHLVEQKNSSGTGMDSSTNNNKYCNVMNDSSVSRLDKQQQEKESCNLFMSRTE* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0582 562 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 334 385 IPR011598 GO:0046983
Amo11g0582 562 MobiDBLite consensus disorder prediction 313 349 - -
Amo11g0582 562 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 95 550 IPR043561 GO:0003700|GO:0006355
Amo11g0582 562 MobiDBLite consensus disorder prediction 541 562 - -
Amo11g0582 562 MobiDBLite consensus disorder prediction 317 349 - -
Amo11g0582 562 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 95 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0582 Amo-Chr11 10499314 10501574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0582 299 520 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 40.444 1.65e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0582 - - adu:110281254 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0582 11 10499314 10501574 Amo01g0742 01 10355199 10364126 hybridization