Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0576 ATGGATTACTTACTTCAACATGAACCAATAATGCGAATGGCTCTACTGTTCGCCATCCCACTTTTACTTCTTCTGCCTTTGGTGTCACGAAAACTTCGTCAAACGACACCGTTTCCGCCAGGGCCAAAGGGGTTGCCAATCATTGGAAACATGAACATCATGGACCAACTTACACACCGRGGTCTTGCCAACCTGGCAAAACAATACGGCGGCGTTTTGCACCTCCGCATGGGGTTCCTCCACATGGTTGCGATTTCGAACCCGGAGGCAGCACGCCAAGTACTCCAGGTGCACGATAATATCTTCTCCAACCGCCCTGCCACCATAGCCATCAGTTACCTTTCTTACGACCGTGCTGACATGGCTTTCGCTCACTACGGCCCCTTCTGGCGTCAGATGCGTAAGCTYTGCGTCATGAAGTTATTTAGCCGTAGACGAGCGGAGTCATGGCAGTCCGTAAGAGACGAGGTTGATACWGCGGTTAAAACCRTAAWTAAAAAYYTCGGGAAGYCCGTGAAYATTGGTGAGCTTGTGTTTAACCTCACCAAAAATATTATTTATAGGGCMGCGTTCGGGTCTARTTCGCAAGAAGGTCAAGATGARTTCATTTCTATATTACAAGAGTTTTCTAAGCTCTTTGGAGCTTTTAACCTTGCGGATTTCATTCCATATCTGGGATGGATTGATCCGCAAGGAATTAACGCYCGGCTYGTCAAAGCGCGYGGGGCWTTGGATAGATTCATAGACAAGATCATYGATGAACATGTGGAGAAAAACAGGAAAAAGGGTCACGGCAAGGTTGATGAAGAAAGTGACATGGTTGATGAGTTGTTAGCGTTTTATGGTGAGGAGGCTAAGTTGAATAATGAATCTGATGATTTGCAGAACTCCATCAGACTAACAAAGGAGAATATCAAAGCCATAATCATGGACGTGATGTTCGGAGGCACGGAAACGGTGGCATCGGCGATAGAATGGGCGATGGCAGAACTCATTAGGAACCCAAATGAGCTGAAGCGCGTGCAACAAGAACTCGCCACCGTCGTTGGCCTCGACCGGCGCGTGGAGGAGGCAGACTTCGAGAAGCTTCCCTACCTGAAATGCGTGATCAAAGAAACCTTGCGCCTCCACCCGCCAATCCCCCTCCTCCTCCACGAGACAGCGGAGGATGCAACGGTGTCCGGATACTTCGTCCCGAAAGGGTCGCGCGTGATGATCAACGCGTGGGCAATAGGGAGGGACAAAGACTCGTGGGAAGACCCTGAAAGTTTTAGGCCTTCACGGTTCTTGGAGGAAGGAGTGGCGGATTTCAAGGGTAGTAACTTCGAGTTCATTCCATTCGGGTCGGGTCGGAGGTCGTGCCCCGGGATGCAATTGGGGCTTTATGCGTTGGAGTTGGCAGTGGCACACCTTCTCCATTGCTTCACGTGGGAGTTGCCTGATGGGATGAAGCCGAGTGAGATGGACATGAGTGATGTMTTTGGACTCACTGCTCCTCTAGCTACTCGTCTCTTTGCTGTTCCCGCTAAGCGGGTCACCTGCCCTCTCTAA 1551 0.4971 MDYLLQHEPIMRMALLFAIPLLLLLPLVSRKLRQTTPFPPGPKGLPIIGNMNIMDQLTHRGLANLAKQYGGVLHLRMGFLHMVAISNPEAARQVLQVHDNIFSNRPATIAISYLSYDRADMAFAHYGPFWRQMRKLCVMKLFSRRRAESWQSVRDEVDTAVKTXXKNXGKXVNIGELVFNLTKNIIYRAAFGSXSQEGQDEFISILQEFSKLFGAFNLADFIPYLGWIDPQGINARLVKARGALDRFIDKIIDEHVEKNRKKGHGKVDEESDMVDELLAFYGEEAKLNNESDDLQNSIRLTKENIKAIIMDVMFGGTETVASAIEWAMAELIRNPNELKRVQQELATVVGLDRRVEEADFEKLPYLKCVIKETLRLHPPIPLLLHETAEDATVSGYFVPKGSRVMINAWAIGRDKDSWEDPESFRPSRFLEEGVADFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPLATRLFAVPAKRVTCPL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0576 516 Pfam Cytochrome P450 39 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PANTHER CYTOCHROME P450 84A1-RELATED 12 516 - -
Amo11g0576 516 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Amo11g0576 516 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 12 516 - -
Amo11g0576 516 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 Coils Coil 284 304 - -
Amo11g0576 516 Gene3D Cytochrome P450 31 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g0576 516 SUPERFAMILY Cytochrome P450 39 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0576 Amo-Chr11 10378898 10383105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0576 46 516 Monolignol Biosynthesis Gene Families AT4G36220 76.956 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0576 K09755 - gmx:100783430 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g1349 05 19173177 19176931 Amo11g0576 11 10378898 10383105 PCT