Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0573 ATGGAAGAAAGTTCTGAAGGAACAGAGACCAGCAAAATCCGTAACATATGCATCCTTGCCCACGTGGACCACGGCAAGACCACCCTCGCCGACCACCTCATCGCTGCTGCAGGTGGCGCCCTCCTCCATCCAAAACTCGCCGGAAGAGTCCGCTTCATGGACTACCTCGACGAGGAGCAGCGCCGCGCCATCACCATGAAGTCCTCCTCCATCTGCCTCCGTTACGGCGACCACTCCATCAACCTCATCGACTCCCCCGGCCACATGGACTTCTGCAGCGAGGTTTCCACCGCCGCCCGCCTCAGCGACGGCGCACTCCTCCTCGTCGACGCTGTCGAAGGCGTCCACATCCAAACCCACGCCGTCCTCCGCCAGTGCTGGATCGAGCGCCTCTCCCCTTGCCTCGTCCTCAACAAGATCGACCGCCTCATCACGGAGCTTAAACTCACGCCGTCCGAGGCCTACGTCCGCTTATTGCGCATCGTTCAAGAAGTTAACGGCATCGTTAGCGCATTCCGTTCCGAGAAGTACCTATCTGACGTGGATTCCCTTCTTGCCACGTCAGGTATGAACCCTAACGAGATTGAGAATGAGGAAGCAGATGATGAAGCTGACGAGTTTCAACCGCAGAAAGGGAATGTGATATTCGCTTGCGCTTTAGACGGTTGGGGATTTGGAATCAATAAATTCGCTGAGATTTATGCTTCCAAGCTTGGTGCTAGTGTAAATGCGTTGTTGAAGGCTCTATGGGGACCTTGGCATTTTAATCCGAAGACGAAGATGATTGCTAAGAAGAAAGTTGGTGGTGGTGGAGACACTGGTAAGGGTAATGCGAAACCGATGTTTGTTCAGTTTGTGTTGGAACCACTGTGGCAGGTTTATGAGGGTGCGCTTAAGGGTGGTGATGAGGGTAAGGGTGTGGTTGAGAAGGTTGTTAGGTCCTTTAATTTGTCGGTGCCGGCGAGGGAGCTTCAGAATAAAGATCCCAAGGCTGTGCTTCAGGCGGTTATCAGCAGGTGGCTGCCGCTCGCGGATGCTGTGTTGTCGATGGTGGTTAGGTGTATGCCAGACCCTGCTGCAGCACAGACATACCGGATATCGCGATTGATGCCGAAGGTTGAGGTGGATAGTGAGGTTGGAGTTGATAGGAGTGTTTTGGAGGAAACAGAGCGTGTGAGGAAGTCTGTGGAGGTTTGTGATTTGAGGGAGGATGCTCCTTGTGTTGCTTTTGTGTCCAAGATGTTTGCGGTGCCGGTTAAAATGCTTCCTCCCCTGAGAGGGGAGAATGGGAATAGTTATGGCGGCGAAGGAGAAAGCGAGTCGGACGAGTGTTTCTTGGCATTTGCTAGGATATTTAGTGGGGTTTTGCATGCTGGTCAGAGAGTTTTCATTCTCTCTGCTTTGTATGATCCATTGAAAAGGGAATCAATGCAGAAACATGTGCAGGAAGCTGAATTGCAGACCTTGTATTTGATGATGGGCCAGGGATTGAAAGTAGTGACATCTGCCAAAGCAGGAAATGTTGTTGCCATTCGGGGCCTCGGCCAGCATATCCTGAAATCAGCTACTCTCAGTTCTAGCATGAATTGTTGGCCGTTTTCAAGTCTCGCATTCCAAGTTGCCCCGACGCTGAGAGTTGCAATTGAGCCGTCTGATCCAGCGGATGTGGGTGCACTGCTGAAAGGATTGAGGCTTTTGAATCGAGCAGATCCGTTTGTCGAGGTTACTGTTTCTGCAAGAGGAGAACATGTGCTCTCTGCKGCCGGGGAYGTTCACCTGGAGAGATGCATAAAGGATTTGAAGGAGAGGTTTGCAAAAGTAAGTTTGGAAGTATCACCGCCTCTTGTGTCCTACAAAGAGACCATTGAGGGAGAGGCATCCAAGATGCTGGAAAGTTTAAAAGCTTTTACTAAGAGCACAGATTATGTTGAGAAAACAACACCAAATGGTAGATGTGTTGTCCGTGTGCGTGTGATAAAACTTTTGCCTTCTCTTACAAAGGTGCTTGATGAAAGTCCTGATTTAGTTGGTGATGTTATTGGAATTAAGTCAGCGCAGACGATAAAAACATTGGATTGCCAGAGACCAAATGTTACTGAGAATGATAATCCGGCTGAGGTTCTAAGAAAACGCATTGTAGATGCAGTGGAGAGTGATGTGCTGAGCTGGAATGAGATTGATAATGATCATGCTGAGAGATGTAAATTGGAGTGGCTGAAACTTTTGAGGAGGATATGGGCTCTAGGACCTAGACAGATTGGTCCGAACATTCTCTTAACTCCTAATATTAAAGCAGAGGGTACGGATAACTCTGTTTTAGTACGGGGTTGTTCTCATGTGTCTGATAAGTTGGGCTTTGTGCCTGATTCTAGTGATGGAAATTCAGTTGCGGAGACATCTTCAAATGCAAGTCAAGCTTTGTACAAAGAAGCCGAGCGCCTTGAGAGTAGTGTRGTATCCGGYTTCGAACTGGCCACTGCCGCRGGACCCTTATGTGATGAACCTATGTGGGGTTTGGCATTTCTTGTTGAGGCGTGGATATCTCCGCTTATTGAACAGAAWGATGAATCTGAAACACATCTACAATCAGAACAGTATGGGATCTTTGCAGGGCAGGTAATTGCCACTGTCAAGGATGCATGTAGAGCAGCCGTGCTTCAGAATAAACCCCGGCTTGTGGAAGCAATGTACTTCTGTGAATTGAATACACCTACTGAATGTTTGGGTCCAATGTATGCTGTACTTAACCGAAGACGGGCCCGAGTTCTGAAAGAAGAGATGCAGGAAGGTTCCCCTTTCTTCACTGTGCATGCYTATGTTCCAGTTTCTGAGAGCTTTGGTTTTGCGGATGAGCTCCGCAAAGGGACTTCRGGTGCTGCAAGTGCGCTTCTTGTCCTTAGTCACTGGGAAGCACTTCCAGAGGATCCTTTCTTTGTACCCAGAACGGAAGAGGAAATTGAAGAGTTTGGAGATGGTTCTAGTGTTCTGCCAAATACAGCTAGAAAGTTAATTAACACAGTCAGACGGCGCAAGGGCCTTCCTGTGGAYGAAAAGGTTGTACAACATGGAACCAAGCAGAGGACGTTGGCTCAGTCTCACGATATACACTTTGAACCTTCATGCAAGCTTGGATGGATTGACATTTTTCAGGAAATCAATAATATCACTTGTACTGAAGGAACTTAA 3186 0.4846 MEESSEGTETSKIRNICILAHVDHGKTTLADHLIAAAGGALLHPKLAGRVRFMDYLDEEQRRAITMKSSSICLRYGDHSINLIDSPGHMDFCSEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCWIERLSPCLVLNKIDRLITELKLTPSEAYVRLLRIVQEVNGIVSAFRSEKYLSDVDSLLATSGMNPNEIENEEADDEADEFQPQKGNVIFACALDGWGFGINKFAEIYASKLGASVNALLKALWGPWHFNPKTKMIAKKKVGGGGDTGKGNAKPMFVQFVLEPLWQVYEGALKGGDEGKGVVEKVVRSFNLSVPARELQNKDPKAVLQAVISRWLPLADAVLSMVVRCMPDPAAAQTYRISRLMPKVEVDSEVGVDRSVLEETERVRKSVEVCDLREDAPCVAFVSKMFAVPVKMLPPLRGENGNSYGGEGESESDECFLAFARIFSGVLHAGQRVFILSALYDPLKRESMQKHVQEAELQTLYLMMGQGLKVVTSAKAGNVVAIRGLGQHILKSATLSSSMNCWPFSSLAFQVAPTLRVAIEPSDPADVGALLKGLRLLNRADPFVEVTVSARGEHVLSAAGDVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGEASKMLESLKAFTKSTDYVEKTTPNGRCVVRVRVIKLLPSLTKVLDESPDLVGDVIGIKSAQTIKTLDCQRPNVTENDNPAEVLRKRIVDAVESDVLSWNEIDNDHAERCKLEWLKLLRRIWALGPRQIGPNILLTPNIKAEGTDNSVLVRGCSHVSDKLGFVPDSSDGNSVAETSSNASQALYKEAERLESSVVSGFELATAAGPLCDEPMWGLAFLVEAWISPLIEQXDESETHLQSEQYGIFAGQVIATVKDACRAAVLQNKPRLVEAMYFCELNTPTECLGPMYAVLNRRRARVLKEEMQEGSPFFTVHAYVPVSESFGFADELRKGTSGAASALLVLSHWEALPEDPFFVPRTEEEIEEFGDGSSVLPNTARKLINTVRRRKGLPVDEKVVQHGTKQRTLAQSHDIHFEPSCKLGWIDIFQEINNITCTEGT* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0573 1061 CDD eEF2_snRNP_like_C 894 973 - -
Amo11g0573 1061 SUPERFAMILY Translation proteins 397 535 IPR009000 -
Amo11g0573 1061 CDD EF2_snRNP_III 542 613 - -
Amo11g0573 1061 Pfam Elongation factor Tu GTP binding domain 12 249 IPR000795 GO:0003924|GO:0005525
Amo11g0573 1061 SUPERFAMILY Ribosomal protein S5 domain 2-like 616 893 IPR020568 -
Amo11g0573 1061 Gene3D Translation factors 358 539 - -
Amo11g0573 1061 SMART EFG_C_a 891 980 IPR000640 -
Amo11g0573 1061 Gene3D Elongation Factor G (Translational Gtpase), domain 3 540 617 - -
Amo11g0573 1061 CDD EF2_II 406 527 - -
Amo11g0573 1061 Pfam Elongation factor Tu domain 2 446 524 IPR004161 GO:0005525
Amo11g0573 1061 SUPERFAMILY EF-G C-terminal domain-like 894 992 IPR035647 -
Amo11g0573 1061 Gene3D - 637 888 IPR014721 -
Amo11g0573 1061 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 8 1031 - -
Amo11g0573 1061 Gene3D - 890 1024 - -
Amo11g0573 1061 Gene3D - 5 221 IPR027417 -
Amo11g0573 1061 PANTHER - 8 1031 - -
Amo11g0573 1061 Pfam Elongation factor G C-terminus 892 976 IPR000640 -
Amo11g0573 1061 PRINTS GTP-binding elongation factor signature 81 91 IPR000795 GO:0003924|GO:0005525
Amo11g0573 1061 PRINTS GTP-binding elongation factor signature 97 108 IPR000795 GO:0003924|GO:0005525
Amo11g0573 1061 PRINTS GTP-binding elongation factor signature 15 28 IPR000795 GO:0003924|GO:0005525
Amo11g0573 1061 PRINTS GTP-binding elongation factor signature 133 142 IPR000795 GO:0003924|GO:0005525
Amo11g0573 1061 PRINTS GTP-binding elongation factor signature 61 69 IPR000795 GO:0003924|GO:0005525
Amo11g0573 1061 CDD EF2 14 235 - -
Amo11g0573 1061 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 11 249 IPR000795 GO:0003924|GO:0005525
Amo11g0573 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 356 IPR027417 -
Amo11g0573 1061 CDD aeEF2_snRNP_like_IV 613 898 - -
Amo11g0573 1061 Gene3D Yeast translation eEF2 (G' domain) 227 341 - -
Amo11g0573 1061 SUPERFAMILY EF-G C-terminal domain-like 540 614 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0573 Amo-Chr11 10333419 10338696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0573 8 1031 Eukaryotic Initiation Factors Gene Family AT3G22980 68.889 0.0 1420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0573 K14536 - pvu:PHAVU_003G003900g 1595.48