Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0527 ATGGGGAAAAGTGTTATTATGCTTTGGAGCTTTTCCCTCCTCCCCTCTTTCTTCATCTTCATGAACTTGTTGGGATTCTTAGAGGCTCAAAATAAGACTCCAATTGTTTATGTGTTTGGTGACTCTCTTGTTGATGTTGGCAACAACAATTACTTGGCTCTTTCTATTGAAAGAGCTGCTCTTCCTCACTATGGTATTGATTATCCTACAAAGAAACCAAATGGGAGGTTTAGTAATGGCAAGAATGCTGCAGATTTTATTGCTGAGAAATTGGGGATCCCAACTTCACCACCTTACCTCTCCCTAGTGTCCAAGTCCCGCAACAACAAGAATGTGTCATTTTTGGGTGGTGTTAGCTTTGCCTCTGGAGGTGCTGGAATATTCAGTGATAAAATAGATGAAATTTCTAGGCAAAACATACCTTTGCCGAATCAAGTGGACTACTACATCAAAGTGCAAGGGCAATTGACCCAACAAATAGGAGGATCTGCACTTCAGTGTCATCTCTCCAAATCCATCTTCGTTGTTGTGATTGGAAGCAACGATCTCTTTGGTTACTTCAACTCAAAGGATCTTCAAAATAAAAGCACCCCTCAACAATACGTTGATTCCATGACTTCCTCCCTAAAACTGCAACTACAGAGATTATACGAGCAAGGTGCAAGGAAATTTGAAATTGCGGGAATTGGTGCAATTGGATGCTGCCCTTCAAACAGGCTTAAGAACAAAACAGAATGCTTCTCGGAAGCCAATTATTGGGCACTTAAATATAATGAAGATCTTAAAACCTTGTTGAAGAATTGGCAATTGGAGAAAAAGGACATAAGATACTCCTACTTCGATACTTATGCCGCTATCGAAGATCTCATTCAGACCCCAATTTCTTATGGATTTACAGAAATAAAAACTGCTTGTTGTGGAATTGGTAAGCTGAATGCTGAGCTTCCATGTCTTCCAATTTCCATTGTTTGTTCCAACAGACAAGACTATCTTTTCTGGGATCCTGTCCATCCTACCGAAGCTGCTACTCGCATCTTTGTCGATAGACTTTTTGATGGACCTTCAAGATATGCATCTCCTATTACCATGAGACAGCTTGTAGCGGCTTGA 1110 0.4054 MGKSVIMLWSFSLLPSFFIFMNLLGFLEAQNKTPIVYVFGDSLVDVGNNNYLALSIERAALPHYGIDYPTKKPNGRFSNGKNAADFIAEKLGIPTSPPYLSLVSKSRNNKNVSFLGGVSFASGGAGIFSDKIDEISRQNIPLPNQVDYYIKVQGQLTQQIGGSALQCHLSKSIFVVVIGSNDLFGYFNSKDLQNKSTPQQYVDSMTSSLKLQLQRLYEQGARKFEIAGIGAIGCCPSNRLKNKTECFSEANYWALKYNEDLKTLLKNWQLEKKDIRYSYFDTYAAIEDLIQTPISYGFTEIKTACCGIGKLNAELPCLPISIVCSNRQDYLFWDPVHPTEAATRIFVDRLFDGPSRYASPITMRQLVAA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0527 369 Pfam GDSL-like Lipase/Acylhydrolase 36 348 IPR001087 GO:0016788
Amo11g0527 369 Gene3D SGNH hydrolase 25 354 IPR036514 -
Amo11g0527 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 367 - -
Amo11g0527 369 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 13 367 - -
Amo11g0527 369 CDD SGNH_plant_lipase_like 34 354 IPR035669 -
Amo11g0527 369 SUPERFAMILY SGNH hydrolase 36 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0527 Amo-Chr11 9191093 9195545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0527 33 353 Acyl Lipid Metabolism Gene Families AT4G10950 31.902 1.65e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0527 - - gmx:100790145 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0527 11 9191093 9195545 Amo11g0527 11 9191093 9195545 ECH
Amo11g0527 11 9191093 9195545 Amo01g0192 01 3288328 3293060 hybridization
Amo11g0527 11 9191093 9195545 Amo07g0380 07 3566949 3570021 PCT
Amo07g0380 07 3566949 3570021 Amo11g0527 11 9191093 9195545 PCT