Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0517 ATGGGTTTCTTGGTAACGTCGCTAATCTTTTTAGTTGTTGGTATAATTGCGTGCCTTTTCACCAGAATTTGCTGCAACAGAGGGCCTTCCACTAATATCTTTCACCTAACTTTGGTCATTACTGCAACAATATGCTGCTGGATGATGTGGGCGATTGTATATCTCGCGCAGATGAAACCGCTCATAGTACCAATACTGAATGAGGTTTATGGATCAAATTGTGCCTGCTGGAGGGATTTGATTTCGGCTCTTATAAATCATTCAGTATTTCATAAGGGTGGGTGTATTTCTTGTTGGACAATACCATGTCAGGTGTTACAATTGTTGAATTTAGCCCTCATTCATTTCAGGAGTTAA 357 0.4006 MGFLVTSLIFLVVGIIACLFTRICCNRGPSTNIFHLTLVITATICCWMMWAIVYLAQMKPLIVPILNEVYGSNCACWRDLISALINHSVFHKGGCISCWTIPCQVLQLLNLALIHFRS* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0517 118 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 69 IPR008389 GO:0033179|GO:0046961|GO:1902600
Amo11g0517 118 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 1 69 - -
Amo11g0517 118 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0517 Amo-Chr11 8866539 8869353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0517 1 68 Primary Pumps ATPases(2) AT5G55290 82.353 4.21e-36 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0517 K02153 - gmx:100781475 137.502