Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0516 ATGGCATCGTCATCAGACTCATGGATGAAGGAATATAATGAAGCAGTGAAACTCGCCGATGATATCAATGGCATGATTTCTGAGCGGAGTTCATTATCCACATCTGGACCAGAAGCTCAGCGTCATGCATCTGCTATAAGAAGGAAGATTACTATCTTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTATCTAAAGTCCCTGGAAAATCTGAGAAGGAGATGAATCGCCGCAGGGAAACACTTACAACTTTGAGGTCAAAAGTTAACCAAATGGCTTCAACACTGAACATGTCAAACTTTGCAAATAGGGATAGTTTATTTGGTCCTGAAATAAAACCAGATGCAATGAGCAGAACTGTTGGCCTGGATAACAGTGGACTCGTTGGACTTCAAAGGCAAATTATGAAAGAGCAAGATGAAGGCCTTGAAAAATTGGAGGAGACTGTTGTAAGTACAAAGCACATTGCATTAGCAGTGAATGAAGAGCTGAGTCTACACACTAGACTAATTGATGACTTGGACGAACATGTAGATGTTACAGATTCTCGTCTAAGGCGTGTCCAGAAGAACTTGGCAGTTTTAAACAAACGTACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTAGCAGTGGTTGGGATAGTGGTTTTGGTGGTTGTGATATGGTTGTTGGTCAAATATTTGTAG 690 0.4174 MASSSDSWMKEYNEAVKLADDINGMISERSSLSTSGPEAQRHASAIRRKITILGTRLDSLQSLLSKVPGKSEKEMNRRRETLTTLRSKVNQMASTLNMSNFANRDSLFGPEIKPDAMSRTVGLDNSGLVGLQRQIMKEQDEGLEKLEETVVSTKHIALAVNEELSLHTRLIDDLDEHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLAVVGIVVLVVVIWLLVKYL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0516 229 Gene3D - 135 197 - -
Amo11g0516 229 CDD SNARE_Qc 136 193 - -
Amo11g0516 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Amo11g0516 229 SMART tSNARE_6 128 195 IPR000727 -
Amo11g0516 229 PANTHER SYNTAXIN 1 223 IPR045242 -
Amo11g0516 229 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 223 - -
Amo11g0516 229 SUPERFAMILY SNARE fusion complex 124 194 - -
Amo11g0516 229 Pfam SNARE domain 170 221 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0516 Amo-Chr11 8850339 8854249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0516 1 229 SNARE and Associated Proteins AT1G16240 72.845 2.86e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0516 K08503 - gmx:100794038 374.4