Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0480 ATGGGCACCGACGGTGGTGCGGCGCTCAAAGACGAGGATTTTTGTTGGGAAGTCGGAAGAAAAAGTGTCATTAACTTTACGTTTGGAGCAAATGGTCCTAGGTTAGATGGCACTATAACCGCACAAAAGCGAATGACAAATGAATCCCCAACAAGATTTGTGTTTAAGGAATGTGTCATAACAAGTGTTAGTGGAAAAGCTGAGCTTGGGAGAGCATATGGACCATTTGCCAAAGTTATCATTGCTAATTTCAGTTTATTAGATGTAGTTCGACCTGAGGGTTGGAATGCTTGGAATTATGTTGGAAATGAGTAA 315 0.4159 MGTDGGAALKDEDFCWEVGRKSVINFTFGANGPRLDGTITAQKRMTNESPTRFVFKECVITSVSGKAELGRAYGPFAKVIIANFSLLDVVRPEGWNAWNYVGNE* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0480 104 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 21 104 - -
Amo11g0480 104 Gene3D - 10 104 IPR012334 -
Amo11g0480 104 SUPERFAMILY Pectin lyase-like 22 100 IPR011050 -
Amo11g0480 104 Pfam Pectinesterase 37 99 IPR000070 GO:0030599|GO:0042545
Amo11g0480 104 PANTHER PECTINESTERASE 21 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0480 Amo-Chr11 8302927 8303668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0480 37 104 Carbohydrate Esterase AT2G19150 44.118 1.07e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0480 - - ahf:112720961 174.866