Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0451 ATGGCGTCTTCGGATGATGAGCCAGAGTCTCAGCCACTATCTGTCTCGAATTACCACTTTGAAGATGACAGGGATGCCCCTGTATCGTTTTCTGTGATGCCAATTCAATGGAGTGGGTCGGAGAGTCCTCAAGGCAAGAAAACAGAGTTGTTCCTCCACGGTGTGGCGGATAATGGGCTGCAGAAGATTATGATGCCGGTCATGGCGTGGCGGTTCGAGCTTTCCTCTGTGAAGCCTGAGATATCTGTGCTGTCATCCAAGGATAGGAGATGGATCAAACTTGAGAAGCCAAGAAAGAGCTATGAGGACATTGTAAGGGGTATTTTAGTAACTGTTTACTTCCTGAGTTTTGCAAAGAAGAATCCTGATGCAACCGCGAAAGCTGCGTGGGATAGCTTGAGTAAGAATAAGGAGTTTAGCTCTTACGAGGTTATGCCTTCGGCAAATGATTTAGTAAATCAGAAGGCTTTGATGAGTGAAGCAGCCAAGAGGGATGCTTTGTTGGCTAAGTCCAAGCTTTTACCCATGGCTCTGGAGGGTAACCTGGGGGCTAAGAAACTTTTTGATGAGGAGCTAAAAGATTTGGCACGGCCTGGATTTATAATTGATGATGATGTTGATGATGACATGACTGATGCAAATGATGAAGAGTCAGATGAAGAAGATGAATTGTTTGATTCTCTTTGTTCTATTTGTGACGATGGTGGTAATCTTTTGTGCTGTGATGGAAAGTGCATGAGATCATTTCATGCTAATAAGGAGGATGGCGTCAACTCTTCTTGTGTCTCTCTTGGTTTTAGCCAGAAGGAAGTTGAAGACATCCCAAATTTTTATTGCAAGAATTGTGAACATAATCAGCATCAGTGCTTTGCATGTGGCAAACTAGGCTGTTCCGATAAATTCTCTGGTGCTGAGGTCTTCCAATGTGCCTCTGCAACCTGCGGCTACTTTTATCATCCTCAATGTGTTGTGAAGTTACTTCATCGATTTAATGAGAATGCTTCAAGGGAACTTGAGACAAATATTAGTCGGGGAGAACCTTTTACTTGTCCATCCCATTACTGCTATGTTTGTAAAGAAACAGAGAACAAAAAGGAACATGAGTTGCAGCTTGCTGTTTGTAGGCGTTGTCCCAAGTCATATCATCGCAAATGTTTGCCAAGAGCAATTGCTTTTGAAGACATAGAAGATGAGGGTATAATAACGAGGGCCTGGGACAATCTAATACCCAATCGTGTTCTTATATATTGCTTAAAACATGATATCGATAATGATCTTGGGACTCCTATACGAGATCACATAACATTCCCCAATGATAAATCTAATGTTCAAGAAGCAAGTACAGAGCAGAAGAGAAAACCTGCAACTGAAGAGAGAGTTATGTTGAAGAATAATGTTAACCTGGATAATTCAGTCAACAAAAGAAGCATTGCTGATGTACCTAAACTGTCTACGAAGGTACCTAAACTCGCTGGAAAAAAGTCTTCTGGACCAGTTGGTATCAAGAAGTTTAATAAGGTTTCAGGATCAAATATCCAAAGGAAACCAATAGATATTGAATCATCTAGAAAACGTTTGTGTGAAAGTAAGAGACCATTCTCAAAGGAAACTGAAAGGCCTGATTGTGAGGAAAATGAGCCCTCAATTGGTGTGCAATTATATGCAATCTGGGAGAAGGGTTCTGGACAAACTGGCTTGGGCAATCAGGTTGATAACAAAGCCAGTGCCAAATCTGTTATACCTACTAGAAAACCAAGCAGCCCATTATGTACATTAGATGCTGATTCGAAGAGGAGACTGTTGGATTTGTTTAATGAAGCTACGTCATCAGTTACTCTTAAGGATGTTGTAAAAGAACGTAAATTTGCTTACACTCATTCTCACTCATTGAAAAATTTTATGGAGAAGACTACAGTTGGGAAGTTGGAACGCTCTGTTGAGGCTGTTCGAACAGCTTTAAAGATGCTAGAGGATGGGCGCAGCATTCGTGATGCAGAAGCTGTTTGTGGCCCTGATGTTCTTAACCAGATATATAAGTGGAAGGACAAGCTGAAAGTATATCTAGCACCTGTTCTGTGTGGTAACCGCTATACGTCATTTGGTCGCCATTTTACACAAGTGGAAAAGCTAGAAGGGATTGTTGATAGACTCCACTGGTATGTTCAGAATGGTGATACGATTGTGGACTTCTGTTGTGGTGCTAACGACTTTAGCATACTTATGAAAAAAAAGCTTGAAGAAACTGGGAAGAGATGCTCATATAAGAACTATGATTTACTTCCAACAAAGGTGAATATACTCTTACAGGTTTATTAG 2316 0.4106 MASSDDEPESQPLSVSNYHFEDDRDAPVSFSVMPIQWSGSESPQGKKTELFLHGVADNGLQKIMMPVMAWRFELSSVKPEISVLSSKDRRWIKLEKPRKSYEDIVRGILVTVYFLSFAKKNPDATAKAAWDSLSKNKEFSSYEVMPSANDLVNQKALMSEAAKRDALLAKSKLLPMALEGNLGAKKLFDEELKDLARPGFIIDDDVDDDMTDANDEESDEEDELFDSLCSICDDGGNLLCCDGKCMRSFHANKEDGVNSSCVSLGFSQKEVEDIPNFYCKNCEHNQHQCFACGKLGCSDKFSGAEVFQCASATCGYFYHPQCVVKLLHRFNENASRELETNISRGEPFTCPSHYCYVCKETENKKEHELQLAVCRRCPKSYHRKCLPRAIAFEDIEDEGIITRAWDNLIPNRVLIYCLKHDIDNDLGTPIRDHITFPNDKSNVQEASTEQKRKPATEERVMLKNNVNLDNSVNKRSIADVPKLSTKVPKLAGKKSSGPVGIKKFNKVSGSNIQRKPIDIESSRKRLCESKRPFSKETERPDCEENEPSIGVQLYAIWEKGSGQTGLGNQVDNKASAKSVIPTRKPSSPLCTLDADSKRRLLDLFNEATSSVTLKDVVKERKFAYTHSHSLKNFMEKTTVGKLERSVEAVRTALKMLEDGRSIRDAEAVCGPDVLNQIYKWKDKLKVYLAPVLCGNRYTSFGRHFTQVEKLEGIVDRLHWYVQNGDTIVDFCCGANDFSILMKKKLEETGKRCSYKNYDLLPTKVNILLQVY* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0451 771 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 284 IPR013083 -
Amo11g0451 771 PANTHER ENHANCED DOWNY MILDEW PROTEIN 1 765 - -
Amo11g0451 771 MobiDBLite consensus disorder prediction 1 20 - -
Amo11g0451 771 CDD PHD2_NSD 288 353 - -
Amo11g0451 771 Pfam Cytosine specific DNA methyltransferase replication foci domain 14 114 IPR022702 -
Amo11g0451 771 SMART PHD_3 355 421 IPR001965 -
Amo11g0451 771 SMART PHD_3 288 354 IPR001965 -
Amo11g0451 771 SMART PHD_3 228 283 IPR001965 -
Amo11g0451 771 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 765 - -
Amo11g0451 771 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 376 IPR013083 -
Amo11g0451 771 MobiDBLite consensus disorder prediction 1 17 - -
Amo11g0451 771 SUPERFAMILY FYVE/PHD zinc finger 341 391 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0451 Amo-Chr11 7585897 7594733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0451 217 329 PHD Transcription Factor Family AT3G14980 29.204 2.74e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0451 - - aip:107622338 1508.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0451 11 7585897 7594733 Amo11g0451 11 7585897 7594733 ECH