Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0420 ATGATAAATAATTTGTTGGTTAATTTTGCTCATGAACACAAGAAAGTGGTCCCAATATCACTGTTTGTTGCTGTTCTGTGCCTTTGCTTGGTCATTGGTCACTTGCTTGAAGAAAATCGATGGGTTAATGAGTCCATTGTAGCCATTTTACTTGGATGCATAGCTGGAAGCATACTCTTATTAGTCACCAAAGGAAAAAGTTCCCACATTCTTACCTTTGATGAAGAACTCTTCTTTATATATCTCCTTCCTCCCATAATCTTCAATGCTGGATTCCAGGTGAAAAAGAAACAATTCTTCCATAACTTCTTAACCATCATGATGTTTGGAGTGATTGGTGTTTTTATTTCGACTTCTATTATTACGGGCGGCAGTTGGTGGCTGTTTCCTAAGTTGAACTTCCTCGGCTTGAGTGCGCGGGATTACCTCGCTATAGGAACAATTTTCTCATCAACAGACACAGTTTGTACACTGCAGGTGCTGCATCAAGATGAAACTCCTTTACTATACAGCCTAGTGTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCTGTTCAAAAGCTTGATGTTTCCAGACTCAGTGGCAGGGCATTCCGCGTTCTCGGAGATTTCTTGTATCTCTTCTCATCAAGCACTGCTCTTGGAGTATTAACCGGACTTCTCACAGCATATATCTTGAAAGGCTTAAGTTTTGGAAGACATTCAAGTGTTCGCGAAATTTCATTGATGATGTTAATGGCATACCTATCTTACATGTTGGCCGAGCTACTTGAATTAAGTGGAATCCTCACTGTTTTCTTTTGTGGGATACTAATGTCACATTATGCATGGCATAACGTAACTGAAATTTCAAGAATCACAACCAGGCATGTGTTTGCGACAATATCGTTTATTGCAGAAACTTTCATATTTCTTTACGTGGGAATGGATGCACTTGACATTGAAAAGTGGAGGATGACCAAATTAAGTTCCGGAAGTTTGATGGGAATTTACGGTTGCTTAATCTTACTGATATTAGTTGGGCGTGCTGCATTCGTCTTCCCGCTCTCGGCTTTTGCCAATTCCATGATGAGTAGGCGCGCCGGGAGCGGGTCAAGTATCACATTCAAACATCAGATAATTATTTGGTGGGCTGGTCTAATGAGGGGAGCAGTCTCAATTGCTCTTGCTTTCAAACAGTTCACATTCTCTGGTGTTACCTCTGATCCCGTGAATGCAACTATGATTACCAACACCATTATTGTTGTTCTTTTCACCACATTAGTGTTTGGTTTTCTAACAAAACCACTGATTAGATATATGCTTCCCCACAACAATGGAACAAGAAGAAACACAAACCATGAAGCAGGAGGGACACCTGGTGAGGACTTGAACTTGCCTTTGTTGTCTTTTGAAGAGTCAGCAGCAACAAACATAAGCCGTGCAAAGGAAAGTCTTTCCATGTTCATAGGGTCTCCAGTATACACCATACATCACTATTGGAGAAAGTTTGATGATGCATACATGAGGCCTCTCTTTGGTGGACCTCACCATAACAGGTCGCGGTGCTAG 1569 0.4124 MINNLLVNFAHEHKKVVPISLFVAVLCLCLVIGHLLEENRWVNESIVAILLGCIAGSILLLVTKGKSSHILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMMFGVIGVFISTSIITGGSWWLFPKLNFLGLSARDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRLSGRAFRVLGDFLYLFSSSTALGVLTGLLTAYILKGLSFGRHSSVREISLMMLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTEISRITTRHVFATISFIAETFIFLYVGMDALDIEKWRMTKLSSGSLMGIYGCLILLILVGRAAFVFPLSAFANSMMSRRAGSGSSITFKHQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVNATMITNTIIVVLFTTLVFGFLTKPLIRYMLPHNNGTRRNTNHEAGGTPGEDLNLPLLSFEESAATNISRAKESLSMFIGSPVYTIHHYWRKFDDAYMRPLFGGPHHNRSRC* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0420 522 Pfam Sodium/hydrogen exchanger family 23 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo11g0420 522 PANTHER SODIUM/HYDROGEN EXCHANGER 8 518 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo11g0420 522 PANTHER SODIUM/HYDROGEN EXCHANGER 8 518 - -
Amo11g0420 522 Gene3D - 138 190 - -
Amo11g0420 522 PRINTS Na+/H+ exchanger signature 77 88 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo11g0420 522 PRINTS Na+/H+ exchanger signature 91 105 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo11g0420 522 PRINTS Na+/H+ exchanger signature 106 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo11g0420 522 PRINTS Na+/H+ exchanger signature 146 156 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0420 Amo-Chr11 6826710 6833077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0420 10 522 Antiporters AT5G55470 72.447 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0420 - - gmx:100813332 850.506