Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0413 ATGCCTGGCGTTAAAGTTCATCCATCATACACAGAGTCGGAGACATTCATTGAGGTGGATCCGACGGGAAGATACGTGAGGTACCCTGAGCTTCTAGGATCAGGTTCAGTGAAGAGAGTGTACAGAGCATTTGACAAAGAAGAGGGAATAGAAGTGGCCTGGAACCAAGTGAGACTGAAGAACTTCAAGGATGACCCTGTCATGCTTCATAGGCTTCACTCCGAAATCATGTTGCTAAAAGGCTTCTCCAACGACCACATCATTTCGCTATTCGCATCCTGGAAGGATGACGTCAGCAACACTTTGAATTTCATCACGGAAGTGTGCAGCAGCGGCAGTATGAGGGAGTACAGGAAGAGGCACAAGAATGTCTCCATGAAGGCCGTCAAGAAATGGTCAAAGCAGATTCTAGAAGGTTTGAATTATTTGCACACACACGATCCCTGCATCATCCACAGAGACCTCAACTGCAGTAATGTGTTTGTCAATGGAAACACCGGCCAGGTTAAGATCGGTGACTTGGGCTTGGCGGCGGTTGTGGGGAGGAGCCACTCGGCACATTCGGTTCTGGGGACGCCGGAGTTCATGGCGCCGGAGTTGTACTCGGAGAAGTACACGGAGAAGGTGGACATATACTCGTTTGGGATGTGTGTGTTGGAGATGGTGACGAGAGAGATACCGTACAGCGAGTGTGAGAGTGTTGTGAAGATATACAAGAAGGTGACGTCAGGCGTGAGGCCGCAGTCGCTGAATAAGATTAATAATTCCGAGCTGAAGTCGTTCATTCACAAGTGCATCGCTCACCCGCCCTCTGCTAGACCTTCTGCTGCTCAGCTTCTTCGCGACCCTTTCTTTCATGACCTTCATGAGTCATGA 876 0.4954 MPGVKVHPSYTESETFIEVDPTGRYVRYPELLGSGSVKRVYRAFDKEEGIEVAWNQVRLKNFKDDPVMLHRLHSEIMLLKGFSNDHIISLFASWKDDVSNTLNFITEVCSSGSMREYRKRHKNVSMKAVKKWSKQILEGLNYLHTHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAVVGRSHSAHSVLGTPEFMAPELYSEKYTEKVDIYSFGMCVLEMVTREIPYSECESVVKIYKKVTSGVRPQSLNKINNSELKSFIHKCIAHPPSARPSAAQLLRDPFFHDLHES* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0413 291 SUPERFAMILY Protein kinase-like (PK-like) 20 285 IPR011009 -
Amo11g0413 291 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Amo11g0413 291 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 289 - -
Amo11g0413 291 ProSiteProfiles Protein kinase domain profile. 26 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0413 291 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0413 291 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 1 289 - -
Amo11g0413 291 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0413 Amo-Chr11 6604023 6604898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0413 12 285 MAP Kinase Kinase Kinase AT5G55560 72.263 2.60e-158 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo11g0413 Pkinase 6.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0413 K08867 - gmx:100782039 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0413 11 6604023 6604898 Amo01g0255 01 4423504 4424379 hybridization