Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0408 AGAGCCACTCTCGAGCCTCCCCTCCAGCCCTCCACTCTTACCTCTCGCTTTCACCACGTCCAGTCTCCACCGCGAGCTTCCAGCGCAACCTCCGTCCAGCCACCGCCTCCGTCGCAAGGTCCTTGGAAGTCACTCACCGTCGCAAGTTCCTTTCAGCTAACTTTCCGTTCGCGCAGCCAACTTTCCTTTCAGCCGTCGAAATCGCAGCCACCGCCAGCGCCAGTTGCCGTCGCGCAGTCTTCTCGCCGGCGCCAGCTCTATTCAACCCTTCCACCCCAACCATTGTCCCTGTCGCCGCCAGCTCTGCACTCTTCCCTGTCTTCCACTAACCCTAGGGTTGCTTGCAATTATCCACACGAGAACATAACATTCAAGATAGATGAGAGTAGTAGCAACCCTAATTACTTGGCATTTGTGATTTGGTATCAACAGGGAATTAGAGATATAACTGCTATCCAGCTTTGTAAGACTGAGAATTTTGAGTGCAAGCTGCTAGATCGAAGCCATGGTGCAGTGTGGAGTAGCACCTGCGGCATTGATGGCATTGATTAG 552 0.5362 RATLEPPLQPSTLTSRFHHVQSPPRASSATSVQPPPPSQGPWKSLTVASSFQLTFRSRSQLSFQPSKSQPPPAPVAVAQSSRRRQLYSTLPPQPLSLSPPALHSSLSSTNPRVACNYPHENITFKIDESSSNPNYLAFVIWYQQGIRDITAIQLCKTENFECKLLDRSHGAVWSSTCGIDGID* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0408 183 Pfam Expansin C-terminal domain 122 175 IPR007117 -
Amo11g0408 183 MobiDBLite consensus disorder prediction 1 43 - -
Amo11g0408 183 MobiDBLite consensus disorder prediction 60 83 - -
Amo11g0408 183 PANTHER EXPANSIN-LIKE B1 111 177 - -
Amo11g0408 183 Gene3D - 114 180 IPR036749 -
Amo11g0408 183 PANTHER EXPANSIN-B3 111 177 - -
Amo11g0408 183 SUPERFAMILY PHL pollen allergen 121 177 IPR036749 -
Amo11g0408 183 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0408 Amo-Chr11 6491455 6492938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0408 112 173 Expansin Gene Family AT4G38400 40.323 5.28e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0408 - - ccaj:109799868 115.931