Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0390 ATGGGGGAGTTGAGTGAGGGCCTTACACAAGTTCTGATACCTGTGGCAGCATTAATTGGAATTGGATTTGCTTTGCTTCAATGGTTCTTGGTCTCAAAGGTCAGAGTGTCTGCTGTTGCTGATRACAATGGCAGGGACAATGGGCACAAAAGCAGCTTACTAGGAGATGCAGAGTTGGAGAKTGGTGTCCGGGTTCCTGAAGTTACTGCTAAGTGTGCCGAAATTCAGCATGCCATTTCTGTTGGTGCTACTTCGTTTCTCTTTACTGAGTATAGGTACCTGACTATCTTCATGGGAGTATTTGGTGTAATAATTTTTCTGTTTCTGGGCTCTGTGAAGGGCTTTAGTACCAAAAGCGAACCTTGCACCTACAATGAAGGCAATCTTTGTAAACCAGCYCTTGCCAATGCTGTGTTTAGCACTATAGCTTTCTTGCTTGGTGCCKTTACCTCTGTCCTTTCTGGCTTTCTTGGGATGAAGATTGCTACCTATGCCAATGCTAGAACAACTCTTGAAGCAAGAAAGGGAATAGGAAAGGCCTTTGTTATTGCTTTCCGCTCTGGTGCGGTGATGGGGTTTCTTCTTGCTGCAAATGGCCTGTTGGTGCTATATGTTGCCATCAATTTATTCAAACTGTATTATGGGGATGACTGGGAGGGACTTTACGAGTCTATTACTGGCTACGGGCTTGGAGGTTCATCAATGGCGCTCTTTGGAAGAGTTGGAGGAGGCATATACACCAAAGCAGCTGATGTTGGTGCTGACCTTGTGGGGAAAGTTGAACAGAATATCCCTGAAGATGATCCACGCAACCCAGCTGTTATTGCTGACAATGTGGGAGACAATGTTGGAGATATCGCAGGTATGGGTTCTGACTTATTCGGGTCCTATGCAGAATCATCCTGTGCAGCTCTATTTGTTGCATCCATATCATCTTTTGGACTGAATCATGACTACACYGCCATGTCATATCCTCTCATCATAAGCTCWATGGGAATTGTGYTTTGCATGATTACAACTRTTTTTGCAACTGATATATTCGAAATAAAATACGAGAACCAAATAGAACCATCCTTGAAACGTCAACTTCTTATCTCTACTGTATTAATGACCGTTGGTATTGCCATAGTCAGCTTCTTTGCTTTGCCATCAGAGTTCACTCTTTATAACTTRGGCGGCAGCAAGGTTGTCAAGAACTGGCACCTTTTCTTCTGTGTTGCCATTGGCTTGTGGGCTGGACTTGTAATCGGGTACATTACTGAGTATTTCACTAGCAATGCTTACAGTCCGGTGCAAGACGTAGCAGATTCCTGCAGGACAGGAGCTGCAACAAATGTTATTTTTGGATTGGCGCTGGGATATAAGTCGGTCATAATTCCCATATTTGCTATTGCAGTTGCTATTTATGTAAGCTTCAGCCTTGCAGCCATGTATGGAATTGCTGTTGCAGCACTTGGAATGCTGAGTACTATTGCCACTGGTCTTGCCATTGATGCGTATGGCCCCATCAGTGATAATGCTGGAGGCATTGCAGAAATGGCTGGATTGAGACATGAGATACGAGAAAGAACAGATGCTCTGGATGCTGCAGGAAACACCACTGCTGCCATAGGCAAGGGTTTTGCTATTGGATCAGCTGCACTTGTGTCTCTTGCATTATTTGGTGCTTATGTGAGCAGGGCAGGCATAAAAACAGTGAACGTTATGACCCCAAAAGTATTTATTGGTTTGATTGTGGGAGCAATGCTTCCTTATTGGTTTTCAGCAATGACAATGAAGAGTGTTGGGAGTGCGGCTCTCAAAATGGTTGAAGAAGTTCGCAGGCAATTCAATACTATTCCTGGTCTCCTAGAAGGAACAGGAAAACCAGATTACGCAAATTGTGTAAAGATTTCTACCGATGCCTCATTGAAGGAGATGATCCCACCCGGTGCACTGGTTTTGCTTGCTCCACTTATTGCCGGAACATTGTTCGGAGTGGAAACACTTGCTGGGGTACTTGCTGGCTCTCTTGTTTCCGGTGTGCAGGTGGCAATTTCAGCTTCAAACACTGGCGGGGCATGGGATAACGCTAAGAAGTACATCGAGGCTGGTATTACGGAGCATGCTGTGTCACTGGGGCCAAAGGGATCAGATGCTCACAAGGCTGCGGTTATAGGTGACACTGTTGGAGACCCTCTCAAAGACACTTCGGGTCCCTCACTCAACATCTTGATAAAGTTGATGGCKGTGGAATCATTGGTATTTGCTCCATTCTTCGCAGCTCATGGAGGCTTAATTTTCAAGTTATTCTGA 2295 0.4484 MGELSEGLTQVLIPVAALIGIGFALLQWFLVSKVRVSAVADXNGRDNGHKSSLLGDAELEXGVRVPEVTAKCAEIQHAISVGATSFLFTEYRYLTIFMGVFGVIIFLFLGSVKGFSTKSEPCTYNEGNLCKPALANAVFSTIAFLLGAXTSVLSGFLGMKIATYANARTTLEARKGIGKAFVIAFRSGAVMGFLLAANGLLVLYVAINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVEQNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFVASISSFGLNHDYTAMSYPLIISSMGIVXCMITTXFATDIFEIKYENQIEPSLKRQLLISTVLMTVGIAIVSFFALPSEFTLYNLGGSKVVKNWHLFFCVAIGLWAGLVIGYITEYFTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVAIYVSFSLAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGLRHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAYVSRAGIKTVNVMTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLLEGTGKPDYANCVKISTDASLKEMIPPGALVLLAPLIAGTLFGVETLAGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGITEHAVSLGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFKLF* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0390 764 PANTHER INORGANIC PYROPHOSPHATASE 5 764 - -
Amo11g0390 764 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Amo11g0390 764 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Amo11g0390 764 Pfam Inorganic H+ pyrophosphatase 65 749 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Amo11g0390 764 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 9 759 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Amo11g0390 764 PIRSF H+-PPtase 9 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0390 Amo-Chr11 6272444 6276442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0390 4 627 Primary Pumps ATPases AT1G15690 78.254 0.0 1006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0390 K23025 - gmx:100812548 1361.67