Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0368 ATGAATGAATCAACTTCAAATCAGTTGAATGAGTGCAATTTGGACAATTCTTCCGAAACATTTCGGTTCACCATGCAGACCAACTGTGTTGTGGATGGAAAATTTGTCCCAAAGGTGGGAATGATTTTCAAGATACTAGAAGAAATTGGAAAGTTCTACAAACATTATTCCAAACTTGCCGGTTTTTCTACCAAAATAAGGAACACGACTCGGGACGAAGACAAGATTAAGAATCAACTAATTGTATGCTCTAGAGAGGGGAGGTGGAAATCAAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCAGCCAGAATTTATGTACACATAATGAAGGATGTTGGTCTTTGGATAATTTCCAAAGTTATTTTAAATCACTCACATCCTTGTTGTGCAGACCAGGCTGAGATGCTCAAACAATACAGGGAGCTTAGCATGTTCGTGCATCGCACCATCGAAACCCACGAGGAAGCTGGAATTAGACCGAGTAAAACTTACCAATCATTTGTGGCAGCAGCTGGCAGCCACCGTGAACTAGAGCTGTACGAGGATTGTCATATATGGATTCCGGTTTACTTGGATCACCACTTTTGGGCAGGGATAAGAAGCACGCAAAGGAGCAAGAGTATACATTCATTTTTCAACAAGTTCATCATACGGAATAGCTCCTTGAGACAATTCAGAGAATTTGATGCTGCAGATTTTCACACTGTGATACCATGCGCAACAAAATCAGCAATAGAGGCACAGTTTCAACGTGTATATACCCATGAGAAGTTCAGGGAAGTTCAAGCTCAATTTAGAGGTAAAGCGAATTGTATCACAAGATCAATGCATTCCACCCTAGGTTTCACAACATATGAAGTCATAGAGCAGGTTTCCAACTCCACATTCAACAAGTTTGTCGTCACCTATGACGCAGTATCACGATATGTAAAGTGCCATTGCTTGCTGTTTGAGTCTAGGGGCATATTGTGCTGCCATTCCCTAAGCGTTCTAAGCTTTGAAGGAGGCATACACACATCAAGAGCAGCCAAGATGAACCTCTACTGGAGCCAAGAAGTAAGAGATTTAATGAATTGGTGTTTTGGTCACACAATATATGTGAATTTGCATTTGAGTCTGAAGAGTTGA 1149 0.4091 MNESTSNQLNECNLDNSSETFRFTMQTNCVVDGKFVPKVGMIFKILEEIGKFYKHYSKLAGFSTKIRNTTRDEDKIKNQLIVCSREGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVGLWIISKVILNHSHPCCADQAEMLKQYRELSMFVHRTIETHEEAGIRPSKTYQSFVAAAGSHRELELYEDCHIWIPVYLDHHFWAGIRSTQRSKSIHSFFNKFIIRNSSLRQFREFDAADFHTVIPCATKSAIEAQFQRVYTHEKFREVQAQFRGKANCITRSMHSTLGFTTYEVIEQVSNSTFNKFVVTYDAVSRYVKCHCLLFESRGILCCHSLSVLSFEGGIHTSRAAKMNLYWSQEVRDLMNWCFGHTIYVNLHLSLKS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0368 382 PANTHER OS03G0843700 PROTEIN 22 148 - -
Amo11g0368 382 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 22 148 IPR031052 GO:0006355
Amo11g0368 382 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 185 341 IPR031052 GO:0006355
Amo11g0368 382 Pfam FAR1 DNA-binding domain 51 135 IPR004330 -
Amo11g0368 382 ProSiteProfiles Zinc finger SWIM-type profile. 306 342 IPR007527 GO:0008270
Amo11g0368 382 PANTHER OS03G0843700 PROTEIN 185 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0368 Amo-Chr11 5838481 5840801 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g0368 FAR1 1.5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0368 - - adu:107484182 354.755