Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0326 ATGACTTCCCAGGTAATGGAAACTAGAAGAGAGGATGCTGAAATTGAAGACATTTCAATAATGTCACCTCCCTTAGTGGGTTCTATGAGAATTGAAGGGTGCAACAATAATGACTATTCTCACAACAATAATGAGTTTTTGTCTCATTCATACTTTCACAACAACTGCTCTGAGATTGATATTCAAATTGATGATTCCAGTTTCAATCAAATTGGCCCTCTCCCCATATATCTCAAGTTTGAAGATGTAGAGTTTAAAGTGAGAAACAATACACGAGCAGCTTCGAAAAACCCTGTGAAGAGAATAGTATCAAAGGTAACTAGAGAAAATAAGAATAATAATGGGGAAGGTGATGATAAATACAAGAAGATTTTGAAGGGTATAACAGGAAGCATTGGACCTGGTGAAATTCTAGCACTAATGGGTCCTTCTGGGAGTGGCAAAACAACCTTGTTGAGAGTCATAGGAGCAAGATTACTTGACAATGTAAAAGGAAAAATCACCTACAACGATGTTCGTTATACGCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATATTCTTTTTCCACAATTAACTGTTGAAGAAACATTAGTTTTCTCCGCATTATTAAGGCTACCAACTAATATGAGCAAGCAGCAAAAATATGCAAAAGTGGACACCACTATCAAGCAGCTAGGCCTTGAAAGATGTCGCAACACAAAAATAGGAGGGGGATATCTGAAAGGCATATCAGGAGGGGAAAGGAAGAGAACAAGCATAGGTTATGAAATTCTTGTTGATCCTTCATTGCTACTGCTTGATGAACCAACTTCAGGCCTTGATTCCACCTCAGCAAACAAACTTCTTGTCACTCTTCAGGGGCTTGCCAAGGCAGGAAGGACCATAATTACAACAATACATCAGCCATCAAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCGGTTTACTATGGTAAGGCCAGAGAATCAATGGACTACTTCTCTTCCTTGAGGTTCATGCCGGAGATACCGATGAATCCGGCCGAGTTCTTGCTCGACTTGGCTACCGGACAAGTCAACGATATAAGTTTTCCAGCCGAAGTTTTGCAAGATCAACTAACTAATGACCCTTCTAGAGCGGTTATTAATTATCTAAAAATAAAGTATAAAGCTTTGTTGGAGCCAAAGGAAAAGGAAAACCATGGAGCAGCAACAACAGCAGAGCATCTTCAACAAGCAATTCAAGTTAAGAAGGAGTGGACATTGAGTTGGTTGGACCAATTTGTGATTCTTTCTAGGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAGTTAAGGCTAGTTCAAGCACTTGGCATTGCACTCTTGTTGGGATTACTTTGGTGGAAATCCTCAACCAACACTGAGGCTCAACTCAGAGATCAGGTTGGTTTAATGTTCTATATATGTATATTCTGGACATCTACATGCATTTTTGGAGCAGTGTACGTGTTTCCATTCGAAAAGATATACTTGATAAAAGAAAGGAAAGCAGACATGTATAGATTAAGCGTATACTACGCATGCAGCACGCTGTGTGACATGGTGGCGCATGTTTTCTATCCCACTTTCTTCATGATCATTGTCTATTTCATGGCCGGCTTCAAGAGGACCGTGGCCTGCTTCTTCTTGACTCTCTTCTCCGTTCTGTTAATCGCCGTCACCAGTCAGGGCGCTGGAGAATTGTTTGGAGCTGCAGTTATGAGTATTAAAAGAGCAGGCATGGCTGCTTCTTTGGTGCTTATGTTGTTCCTTCTTACTGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGCAGTGGTTGAAGTATTTATCCTACTTATTCTACGGATTCAGGCTTCTTCTAAAAGTGCAGTATTCCGGAGACCAATTATATGACTGTGAAAGTGAGGGAGGGTGCAGACCCTTGCAAAGTTCACCAACATTTAGCACTGTTAACTTGAAAGGTGGCTTGAAAGAAGTTTGGGTTGTGCTAGCCATGGCTATGTGCTTCAGGTTCTTGGCTTACATTTGCCTCCGCAGAAGAATTGATGCCTACAAATAA 2103 0.4085 MTSQVMETRREDAEIEDISIMSPPLVGSMRIEGCNNNDYSHNNNEFLSHSYFHNNCSEIDIQIDDSSFNQIGPLPIYLKFEDVEFKVRNNTRAASKNPVKRIVSKVTRENKNNNGEGDDKYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGARLLDNVKGKITYNDVRYTPAVKRRIGFVTQEDILFPQLTVEETLVFSALLRLPTNMSKQQKYAKVDTTIKQLGLERCRNTKIGGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLVTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARESMDYFSSLRFMPEIPMNPAEFLLDLATGQVNDISFPAEVLQDQLTNDPSRAVINYLKIKYKALLEPKEKENHGAATTAEHLQQAIQVKKEWTLSWLDQFVILSRRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSTCIFGAVYVFPFEKIYLIKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMIIVYFMAGFKRTVACFFLTLFSVLLIAVTSQGAGELFGAAVMSIKRAGMAASLVLMLFLLTGGYYVQHIPKFMQWLKYLSYLFYGFRLLLKVQYSGDQLYDCESEGGCRPLQSSPTFSTVNLKGGLKEVWVVLAMAMCFRFLAYICLRRRIDAYK* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0326 700 Gene3D - 113 342 IPR027417 -
Amo11g0326 700 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 696 - -
Amo11g0326 700 SMART AAA_5 134 325 IPR003593 -
Amo11g0326 700 CDD ABCG_EPDR 120 329 - -
Amo11g0326 700 Pfam ABC-2 type transporter 431 639 IPR013525 GO:0016020|GO:0140359
Amo11g0326 700 Pfam ABC transporter 125 275 IPR003439 GO:0005524
Amo11g0326 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 166 IPR027417 -
Amo11g0326 700 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 12 696 - -
Amo11g0326 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 341 IPR027417 -
Amo11g0326 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 106 347 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0326 Amo-Chr11 4975411 4982328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0326 123 308 Calmodulin-binding Proteins AT2G36910 30.526 1.08e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0326 K05681 - gmx:100806094 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0326 11 4975411 4982328 Amo11g0326 11 4975411 4982328 ECH