Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0323 ATGATGAGTTCTGTTTCTTCAACAATACTCCCTTATGAAACACAACAAAATAGGCCTTCTTTGATGACTAGAACGGCCATGAGAATATCGAGATCGAGATGGTTCACATTCTTGAGGAGAGTATTCCACTACCAAAACGGGCCGAGTTCTTCTTCGTCAGAACTCGGCTCGAACCCTTTCAATTCCAGCACCTGGATGGGGCTGGAATTGGTTGCATTGGTGGTTCAAATAACTAGCACGACTCTCACTCTTGCGATTTCCAAGAGTGAGAGACCAATTTGGCCTATGAGGATTTGGGTAGCTGGTTATGACATTGCTTGTGTTCTTAATTTGTTGCTTCTTTGTGGCCGCTACCATCAAATTCATGTCACCACTCATAGAGATGTTCTTAGCGATTTGGAGCAGCAGAGATACAATAATGGAGATGCAAGTTTACAGAAAAGGGCACATTTGATGAACAAATGCCGGAGTTCATTAGAGCTTTTCTTTGCAATGTGGTTTGTGATGGGAAATGTTTGGGCCTTTGACTCACGTTTTGGGTCATTCCAAGAAGCCCCAAAACTCAATATTCTATGCATAATTTTGCTCTCTTGGAATGCAATATGCTACTCTTTCCCTTTCCTACTGTTCTTGTTGCTTTGTTGCATTGTCCCTTTAATTAGTACCTTCCTTGGTTACAACATGAACATGGGATCTAATGCTAAGGGTGCTTCTGAGGATCAAATCTCACAAATTCCAAGTTGGAGATATAAACAAGTTCATGATCATCATGCTTTAGATCATTGCAATCATAAGGATTGTTCTCAAACATTCATCAATGAGGATCAAGAGTGTTGTATTTGCTTGAACAAGTACAAAGACAAAGAAGAAGTTAGGCAATTGCCCTGTTTCCATCTCTTCCATAAAAAATGTGTGGATCAATGGCTAAGAATTATATCATGCTGCCCTCTTTGTAAACAAGGATTACAAAGGTAG 975 0.4021 MMSSVSSTILPYETQQNRPSLMTRTAMRISRSRWFTFLRRVFHYQNGPSSSSSELGSNPFNSSTWMGLELVALVVQITSTTLTLAISKSERPIWPMRIWVAGYDIACVLNLLLLCGRYHQIHVTTHRDVLSDLEQQRYNNGDASLQKRAHLMNKCRSSLELFFAMWFVMGNVWAFDSRFGSFQEAPKLNILCIILLSWNAICYSFPFLLFLLLCCIVPLISTFLGYNMNMGSNAKGASEDQISQIPSWRYKQVHDHHALDHCNHKDCSQTFINEDQECCICLNKYKDKEEVRQLPCFHLFHKKCVDQWLRIISCCPLCKQGLQR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0323 324 Pfam Ring finger domain 277 319 IPR001841 -
Amo11g0323 324 SUPERFAMILY RING/U-box 261 322 - -
Amo11g0323 324 CDD RING-H2_RNF111_like 277 319 - -
Amo11g0323 324 ProSiteProfiles Zinc finger RING-type profile. 278 319 IPR001841 -
Amo11g0323 324 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 14 323 - -
Amo11g0323 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 323 IPR013083 -
Amo11g0323 324 SMART ring_2 278 318 IPR001841 -
Amo11g0323 324 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 14 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0323 Amo-Chr11 4902723 4906394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0323 24 322 C3H Transcription Factor Family AT4G26580 64.452 1.15e-131 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0323 - - ahf:112791228 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0323 11 4902723 4906394 Amo11g0323 11 4902723 4906394 ECH