Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0322 ATGATGGTGGATACGGGTTCTGTGTCAAGAAGTGCTGGTTCCCTTGTAGATATGATGCCAGAGAAAGATGATGATGGCCGAGGGAAGAAAGTGACGATGGAGGATTTGTATGATATTAAAACATTGAAGATTGGTGGTCATTCAGTATGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGTAGAGTATTTGAAAGAGCATATCTTTGATAATCTCATGAAGCATTCAAAATTTTTTACTAATGCCAAATTGGCTATAAGTGAAACGTACCAAGGGACTGATTCTCAATTTCTGGATTCTGGAAAAGACACTTTGCAGGATGATGGCTCTACTACTTCAACAACTGTTTGA 360 0.3861 MMVDTGSVSRSAGSLVDMMPEKDDDGRGKKVTMEDLYDIKTLKIGGHSVCLFGIFDGHGGSRAVEYLKEHIFDNLMKHSKFFTNAKLAISETYQGTDSQFLDSGKDTLQDDGSTTSTTV* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0322 119 ProSitePatterns PPM-type phosphatase domain signature. 51 59 IPR000222 GO:0043169
Amo11g0322 119 Gene3D - 23 119 IPR036457 -
Amo11g0322 119 PANTHER ALPHABET, ISOFORM E-RELATED 27 119 - -
Amo11g0322 119 SUPERFAMILY PP2C-like 27 116 IPR036457 -
Amo11g0322 119 MobiDBLite consensus disorder prediction 97 119 - -
Amo11g0322 119 MobiDBLite consensus disorder prediction 1 28 - -
Amo11g0322 119 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 27 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0322 Amo-Chr11 4899927 4900366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0322 1 119 PP2C-type Phosphatase Gene Family AT5G53140 56.429 1.81e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0322 K17506 - gmx:100813138 186.422