Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0307 ATGCCTGAAAGCTTAAGGAATCTTTCACTTTCTCCCAAAATCTTCTTCTTCACCTTGCTTCTTTCATTAAACATCATTCTCCTCTTTCCATGTTGTTGTTTCTCACTTAATGAACAAGGCCAAGCTCTTTTATCATGGAAGAACAGTTTAAACAGCACTTCAGATTCATTAGCATCATGGAACAATTCTACTTCAACACCATGCAACTTTTTTGGTGTTCGTTGCAACTCACAAGGGGATGTTGTCCAAATAAATTTGAAATCAGTGAACTTGGAAGGTTCATTGGTACCTTCAAATTTTCAACCATTAAGGTCACTGAAGATTCTTATCCTCTCATCAACAAACATCACAGGAAGGATCCCAAAGGAGATTGGAGACTACCAAGAACTCATGTTTCTTGATCTTAGTGGCAATTCTCTATTTGGTGAAATCCCAGAAGAGATTTATAGGCTAAGAAAACTAGTTAGTTTGTCCCTTCACAGAAACTCACTTGAAGGAAACATTCCATTCAGCATTGGGAATCTATCAAGCCTTGTGAACTTGACACTCTATGATAATCATCTCAGTGGTGTGATTCCAAAGAGCATTGGATCCTTAACCAAGCTTCAAGTGTTTAGAGCTGGTGGCAACAAGAATCTTAAGGGTGAGCTTCCATGGGAGATTGGAAACTGCACCAACTTGGTCATGTTAGGTCTTGCAGAAACCAGCATTTCTGGGAGAATCCCTTCATCAATTGGAATGCTGAAAAGGATTCAAACTATGGCAATTTACACAACACTATTGTCAGGTCCTATTCCAGAAGAGATTGGCAATTGCAGTGAGTTGCAGAACATTTACTTGTACCAGAACTCTCTCTCAGATTCAATCCCAAACCAAATTGGAGAACTCAGCAAGCTTCAGAATCTTCTTTTATGGCAGAACAACATAGTTGGTACAATCCCAGAAGACCTTGGAAGATGCAGAGAGATCAAGGTCATAGATTTCTCCGAAAACCTTCTGACAGGTAACATTCCAAGGAGTTTTGGTCAGCTTTCTAATCTTGAAGAGCTTCAGCTTAGTGTCAACCAGGTCTCAGGCTCCATACCTCCTGAAATCTCAAACTGCACCTCTCTGGTTCAGCTGCAGCTCGACAACAACGCTCTCTCCGGCGAGATTCCGGCACGCATCGGCGACTTGAGAAGCCTAACTCTGTTCTATGCTTGGCAGAACAATCTAACAGGAAAACTCCCAGATAGTCTTTCTGAGTGCCAAGAACTTGAGGCACTTGATCTTTCATACAACAATTTGATAGGTCCAATTCCAAACCAACTATTCGAATTGAAAAATCTCACCAAACTCTTGCTTCTTGCAAATGATTTATCCGGCGTTATCCCGCCGGATATAGGTAACTGCACTAGCCTATACCGGCTCCGGTTGAATCACAATAGACTAGCAGGTAACATTCCACAAAAGATTGGAAACTTAAAAAATCTGAATTTCTTGGATTTGAGCAACAACCATCTCACTGGGGACTTTCCTCAAACACTTGGTGGGTGCCAGAACCTTGAGTTCTTGGATCTTCATTCAAACAGCATCACAGGTTCTGTTCCTGATTCTCTTCCCAAAAGCCTTCAATTAATTGACATATCAGATAACATGCTTTCAGGATCATTGACTCATTCCATTGGTTCACTGAATGAATTAACAAAACTCTACCTTGGAAAGAACCAAATCAATGGAAGAATACCTTCAGAGATTCTCTCTTGTTCCAAGCTACAACTTCTTGATCTAGGAAGCAACAGTTTCTCAGGGGAAATCCCAAAAGAACTTGGCCTACTTTCTTCGCTCGAAATCTCGCTGAATCTCAGCCATAACCGACTCTCCGGCGAGATTCCGACCGAGTTTTCGAGCCTGGGAAAGCTAGGAGTACTTGATCTCTCACACAACAATCTCACAGGGAACTTAGATGCTCTTTCTAGCCTTCAAAATCTTGTTTCCTTGAATGTTTCCTTCAATGGCTTCTCTGGTGAATTACCAAACACACCATTCTTCCATAAGCTCCCTCTCCATGATCTCGCCGAAAATCAAGGTCTCTATCTTTCTGGAACTGCTATAAACTCTTCTTTGAAAACAGAGTCAAAGAGTCACAAAAAATCAGTTATGAAGTTTGTTATGTCAATTCTCCTAAGCACCAGTGCTGCACTGGTGCTGCTAACGGTCTGCGTCCTGGTTCGTTCACGATTGAACGAATCACGGATGCAGGCCGATAGCTGGGAATTGACATTATATCAAAAATTTGAAATATCCATTGATGAAATTGTCTTGAATTTGACCTCATCGAATGTGATTGGAACCGGAAGCTCTGGAGTGGTGTACAAGGTATTGATTCCCAACGGCGAAATACTAGCCGTTAAGAAGATGTGGTTGTCCACGTCATCGGAAGAATCTAGAGCATTTGATAACGAGATTCGAACACTTGGATCAATTAGGCACAAGAATATCATAAGGCTTCTTGGTTGGGGATCCAACAGGAACTTGAAACTCCTTTTCTATGATTATCTCCCTAATGGAAGTTTGAGTTCTTTGCTTCATGGTTCGGGGAAGGGAAAAGCTGAATGGGAAACAAGATATGACGTTGTGTTGGGTGTGGCTCATGCACTTTCATATTTGCACCATGATTGTGTTCCTTCTATAATCCATGGAGATGTTAAGGCCATGAATGTCTTGTTAGGACCTGGATTTCAACCTTACCTTGCTGATTTTGGTCTTGCAAGAATTGCTACTGATACTGAAAATTCTATGCAAAGACACTACCTTGCTGGTTCATATGGATACATGGCTCCTGAGCATGCATCTATGCAACCAATAACTGAAAAGAGTGATGTATACAGTTTCGGAATGGTTCTACTTGAGGTTCTAACAGGAAGGCACCCATTAGACCCAACCCTACCAATGGGTGCACCCTTGGTTCAATGGGTTAGGAACCACTTAGCCAACAAAGGTGACCCATCAGACATCCTTGACTCAAAGCTCAAAGGGAGATCTGACCCTACCATGCATGAGATGATACAAACTTTGGCAGTGTCATTTCTGTGTGTTAGCACAAGAGCAAATGATAGGCCAACAATGAAGGATGTTGTTGCAATGTTAAAGGAAATTAGGCCTATTGAAACATCAAGGCCTGATTATGATGTGCTGAAGAATAAAAAAGGAGGTTTGAGCTTAGCATCACATAGTTCTTCACCAATTAGACCACCATCACCATCACCATCACCATCACTACCTCCTAGGAATGCTGTTGTTTCTCATGGATCTTCTAATTGTTCCTATAATTTCTCTGATGAGTCAAACAGTTAA 3336 0.4146 MPESLRNLSLSPKIFFFTLLLSLNIILLFPCCCFSLNEQGQALLSWKNSLNSTSDSLASWNNSTSTPCNFFGVRCNSQGDVVQINLKSVNLEGSLVPSNFQPLRSLKILILSSTNITGRIPKEIGDYQELMFLDLSGNSLFGEIPEEIYRLRKLVSLSLHRNSLEGNIPFSIGNLSSLVNLTLYDNHLSGVIPKSIGSLTKLQVFRAGGNKNLKGELPWEIGNCTNLVMLGLAETSISGRIPSSIGMLKRIQTMAIYTTLLSGPIPEEIGNCSELQNIYLYQNSLSDSIPNQIGELSKLQNLLLWQNNIVGTIPEDLGRCREIKVIDFSENLLTGNIPRSFGQLSNLEELQLSVNQVSGSIPPEISNCTSLVQLQLDNNALSGEIPARIGDLRSLTLFYAWQNNLTGKLPDSLSECQELEALDLSYNNLIGPIPNQLFELKNLTKLLLLANDLSGVIPPDIGNCTSLYRLRLNHNRLAGNIPQKIGNLKNLNFLDLSNNHLTGDFPQTLGGCQNLEFLDLHSNSITGSVPDSLPKSLQLIDISDNMLSGSLTHSIGSLNELTKLYLGKNQINGRIPSEILSCSKLQLLDLGSNSFSGEIPKELGLLSSLEISLNLSHNRLSGEIPTEFSSLGKLGVLDLSHNNLTGNLDALSSLQNLVSLNVSFNGFSGELPNTPFFHKLPLHDLAENQGLYLSGTAINSSLKTESKSHKKSVMKFVMSILLSTSAALVLLTVCVLVRSRLNESRMQADSWELTLYQKFEISIDEIVLNLTSSNVIGTGSSGVVYKVLIPNGEILAVKKMWLSTSSEESRAFDNEIRTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDVVLGVAHALSYLHHDCVPSIIHGDVKAMNVLLGPGFQPYLADFGLARIATDTENSMQRHYLAGSYGYMAPEHASMQPITEKSDVYSFGMVLLEVLTGRHPLDPTLPMGAPLVQWVRNHLANKGDPSDILDSKLKGRSDPTMHEMIQTLAVSFLCVSTRANDRPTMKDVVAMLKEIRPIETSRPDYDVLKNKKGGLSLASHSSSPIRPPSPSPSPSLPPRNAVVSHGSSNCSYNFSDESNS* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0307 1111 Gene3D Ribonuclease Inhibitor 335 432 IPR032675 -
Amo11g0307 1111 Gene3D Ribonuclease Inhibitor 198 334 IPR032675 -
Amo11g0307 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 891 903 IPR008271 GO:0004672|GO:0006468
Amo11g0307 1111 MobiDBLite consensus disorder prediction 1055 1111 - -
Amo11g0307 1111 PRINTS Leucine-rich repeat signature 631 644 - -
Amo11g0307 1111 PRINTS Leucine-rich repeat signature 491 504 - -
Amo11g0307 1111 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Amo11g0307 1111 SUPERFAMILY L domain-like 34 314 - -
Amo11g0307 1111 SMART LRR_typ_2 103 127 IPR003591 -
Amo11g0307 1111 SMART LRR_typ_2 440 464 IPR003591 -
Amo11g0307 1111 SMART LRR_typ_2 488 512 IPR003591 -
Amo11g0307 1111 SMART LRR_typ_2 344 368 IPR003591 -
Amo11g0307 1111 SMART LRR_typ_2 296 320 IPR003591 -
Amo11g0307 1111 SMART LRR_typ_2 151 175 IPR003591 -
Amo11g0307 1111 SMART LRR_typ_2 606 630 IPR003591 -
Amo11g0307 1111 SMART LRR_typ_2 558 582 IPR003591 -
Amo11g0307 1111 SMART LRR_typ_2 631 654 IPR003591 -
Amo11g0307 1111 Gene3D Ribonuclease Inhibitor 535 723 IPR032675 -
Amo11g0307 1111 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1059 - -
Amo11g0307 1111 ProSitePatterns Protein kinases ATP-binding region signature. 776 799 IPR017441 GO:0005524
Amo11g0307 1111 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Amo11g0307 1111 Pfam Leucine rich repeat 466 525 IPR001611 GO:0005515
Amo11g0307 1111 Pfam Leucine rich repeat 298 356 IPR001611 GO:0005515
Amo11g0307 1111 ProSiteProfiles Protein kinase domain profile. 770 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0307 1111 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1059 - -
Amo11g0307 1111 Gene3D Phosphorylase Kinase; domain 1 735 846 - -
Amo11g0307 1111 SUPERFAMILY RNI-like 291 659 - -
Amo11g0307 1111 SUPERFAMILY Protein kinase-like (PK-like) 769 1057 IPR011009 -
Amo11g0307 1111 Gene3D Ribonuclease Inhibitor 433 534 IPR032675 -
Amo11g0307 1111 Gene3D Ribonuclease Inhibitor 36 195 IPR032675 -
Amo11g0307 1111 MobiDBLite consensus disorder prediction 1089 1111 - -
Amo11g0307 1111 Pfam Protein kinase domain 773 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0307 1111 SMART serkin_6 770 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0307 1111 Gene3D Transferase(Phosphotransferase) domain 1 847 1062 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0307 Amo-Chr11 4678252 4682671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0307 33 1109 Receptor kinase-like Gene Family AT5G56040 64.062 0.0 1367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo11g0307 Pkinase 1.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0307 - - gmx:100802880 1661.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0307 11 4678252 4682671 Amo11g0307 11 4678252 4682671 ECH