Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0270 ATGGCAAGGAAATTAGGGTACTTGAGATTTTTTATTGTTTGTGTGATAGCATCAATTGTTGCAACAACACATGCTCAATTGCAGCTTGGTTTCTATGCTAAAAGCTGCCCAAAAGCTGAGAAGATTGTTTCTGATTTTGTGAATGAGCACATCCACAATGCTCCTTCACTTGCAGCTGCATTAATAAGAATGCATTTTCATGATTGTTTTGGGTGTGATGGATCAGTGCTTCTGAACAACACAAACCAGCAAGCTGAGAAGAATGCTCCACCAAACTTGACAGTGAGAGGGTTTGACTTCATTGAGAGAATAAAGAGCCTTGTGGAAGCTGCATGCCCTGGTGTTGTTTCTTGTGCTGATATCTTAACTTTGGCTGCCAGAGACTCCATTGTTGCCACTGGTGGACCCTTCTGGCAAGTTCCAACAGGTAGAAGGGATGGTTTAGTTTCTAATTTGTCAGAAGCCACAAGAAACATTCCTGCTCCATTTGATAACTTCACCACCCTGCAAACTAAGTTTAACAATGCTGGACTTGATCTCAATGACTTAGTCATTCTATCTGGTGCACACACAATTGGAGTGTCTCACTGCTCAACAATCAGCAACCGTTTGTACAACTTCACTGGGAAGTTAGATGAAGACCCTGCACTAGACAGTGAGTATGCACAAAATCTGAAGAAATTCAAGTGCAAGAGCATCAATGACAACACCACTTTGATTGAGATGGACCCTGGTAGCCGCAAGACCTTTGATCTTGGTTACTATAACCAAGTTGTTAAGAGAAGAGGCCTATTCACTTCAGATTCTCAGTTGTTGGTCAACAGTGTTACAAACTCTCTGGTGAACCAATTGCTTCAAGGGTCACTTCGGAATTTCCATGCTCAATTTGCAATATCTATGGAGAAAATGGGAAGAATTAATGTCAAGACAGGGACACAAGGTGAAATCAGGAAGCAATGTGCATTGGGGAAGGTTAATGCTCTTGCTGCAATAAGGATAAGTGAGAGAGGAATTGTTGTGTTTCCCATGTTCATGTATAAGATGGAACCTGTTAATTAA 1059 0.4136 MARKLGYLRFFIVCVIASIVATTHAQLQLGFYAKSCPKAEKIVSDFVNEHIHNAPSLAAALIRMHFHDCFGCDGSVLLNNTNQQAEKNAPPNLTVRGFDFIERIKSLVEAACPGVVSCADILTLAARDSIVATGGPFWQVPTGRRDGLVSNLSEATRNIPAPFDNFTTLQTKFNNAGLDLNDLVILSGAHTIGVSHCSTISNRLYNFTGKLDEDPALDSEYAQNLKKFKCKSINDNTTLIEMDPGSRKTFDLGYYNQVVKRRGLFTSDSQLLVNSVTNSLVNQLLQGSLRNFHAQFAISMEKMGRINVKTGTQGEIRKQCALGKVNALAAIRISERGIVVFPMFMYKMEPVN* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0270 352 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Amo11g0270 352 Gene3D Peroxidase, domain 2 160 303 - -
Amo11g0270 352 PANTHER PEROXIDASE 13 321 - -
Amo11g0270 352 PANTHER PEROXIDASE 25-RELATED 13 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601|GO:0042744
Amo11g0270 352 Gene3D - 30 321 - -
Amo11g0270 352 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 Pfam Peroxidase 44 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Amo11g0270 352 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo11g0270 352 SUPERFAMILY Heme-dependent peroxidases 26 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0270 Amo-Chr11 3947135 3948825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0270 8 322 Peroxidase AT1G05260 65.931 1.77e-156 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0270 K00430 - gmx:102660930 498.434