Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0256 ATGTCCAAAGAACATCTACCATATAGTTTTCTCAACATGTGCAAAGGTCCACAAGGAAAAGGGCATGCCTCAACAAGAGGAATAGCTTCTTCTTCTTCTACATGTTGTTGTGAGTTATGTGGATTAAGGGCTTCATTGTATTGCCATGCTGATGATGCATATCTATGTAGAAAATGTGACAGATGGGTTCATGAAGCAAATTTCTTGGCCCTTAGACACATTAGATGCTTTCTCTGCAACACATGCAGCAATCTCACAAGAAGATGTGTTATTGGTGCTTCATCAGAGGTTATTCTTCCTGTTAATATTCATCAGCAACCAATTATTAGAAGGCAACATGAAAACATCACTTTCTTTCCTAGCTGA 366 0.3852 MSKEHLPYSFLNMCKGPQGKGHASTRGIASSSSTCCCELCGLRASLYCHADDAYLCRKCDRWVHEANFLALRHIRCFLCNTCSNLTRRCVIGASSEVILPVNIHQQPIIRRQHENITFFPS* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0256 121 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 21 102 - -
Amo11g0256 121 CDD Bbox1_BBX-like 36 78 - -
Amo11g0256 121 PANTHER B-BOX ZINC FINGER PROTEIN 29 21 102 - -
Amo11g0256 121 SMART bboxneu5 32 78 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0256 Amo-Chr11 3883968 3884963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0256 37 100 C2C2-CO-like Transcription Factor Family AT3G21890 61.538 3.08e-23 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0256 - - aip:107610340 200.29