Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0235 ATGTGTAAAGTGGAAGAAATGTTAGAAGAACCACTTCAATCTGTATCTTATCCTCTGAAACCTATCATCTCTTCTCCTACAAGACCCCTCTTACAGTATCCAGATGCAACTCATAGTTGTTGTTTCGATCGGCAAGTTGAGGAGCTAATAAAAAATTATGGTACTGCAATTCTAGTGAGATGTAATTTTGCAGAAGATAAAGAAGATATGGTATTTTTGGCAGTAAAGGTACTTAAGGAGTCAAAAGAATATATGAAAGAATTTGTAAACGAGGTTGTTATTATTAGTAGAACATTTCATGCACTCATTTATGAATTCATGTCTAATGGTTTTTTGGATAAATTTACATATAAGCAAGGATCTTTCCATCTCATTTCTAATTTAGATTGGGACACACTATATCAAATTACAATTAGTGTTGGTCGAGAATTAGACTATTTACATCGAAGTTGTAATACGAGAATTTTGCAACTTGATATCAAACCCCAAAATATTCTTCTTGATAAAAATTTTTGTCTAAAAATTACAGATGTTGAATTAGCTAAAATATACAAAAAGAATGAAAGTATTATGCCCATGTTGGGTACAAGATGGACTCCAGGTTATATTACACGAGAAATATTTAGTAGAATGTATGGTGGAGTTTCTCACAAAACGGACATGTAA 666 0.3168 MCKVEEMLEEPLQSVSYPLKPIISSPTRPLLQYPDATHSCCFDRQVEELIKNYGTAILVRCNFAEDKEDMVFLAVKVLKESKEYMKEFVNEVVIISRTFHALIYEFMSNGFLDKFTYKQGSFHLISNLDWDTLYQITISVGRELDYLHRSCNTRILQLDIKPQNILLDKNFCLKITDVELAKIYKKNESIMPMLGTRWTPGYITREIFSRMYGGVSHKTDM* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0235 221 PANTHER TYROSINE KINASE FAMILY PROTEIN 69 221 - -
Amo11g0235 221 ProSiteProfiles Protein kinase domain profile. 47 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0235 221 SUPERFAMILY Protein kinase-like (PK-like) 69 221 IPR011009 -
Amo11g0235 221 PANTHER RUST RESISTANCE KINASE LR10-RELATED 69 221 IPR045874 GO:0004672
Amo11g0235 221 Pfam Protein kinase domain 71 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g0235 221 Gene3D Transferase(Phosphotransferase) domain 1 44 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0235 Amo-Chr11 3508022 3509135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0235 44 221 Receptor kinase-like Gene Family AT1G66980 43.299 1.19e-45 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo11g0235 Pkinase 7.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0235 - - ahf:112729553 195.282